Use of phylogenetics in the molecular epidemiology and evolutionary studies of viral infections
Published 2010 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Use of phylogenetics in the molecular epidemiology and evolutionary studies of viral infections
Authors
Keywords
-
Journal
CRITICAL REVIEWS IN CLINICAL LABORATORY SCIENCES
Volume 47, Issue 1, Pages 5-49
Publisher
Informa UK Limited
Online
2010-04-02
DOI
10.3109/10408361003633318
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- HIV Type 1 Group M Subtype G in Cameroon: Five Genome Sequences
- (2009) Julie Yamaguchi et al. AIDS RESEARCH AND HUMAN RETROVIRUSES
- Differential Stepwise Evolution of SARS Coronavirus Functional Proteins in Different Host Species
- (2009) Xianchun Tang et al. BMC EVOLUTIONARY BIOLOGY
- Resistance mutations in HIV-1 infected pregnant women and their infants receiving antiretrovirals to prevent HIV-1 vertical transmission in China
- (2009) J Han et al. INTERNATIONAL JOURNAL OF STD & AIDS
- Transmitted Drug Resistant HIV-1 and Association With Virologic and CD4 Cell Count Response to Combination Antiretroviral Therapy in the EuroSIDA Study
- (2009) Wendy P Bannister et al. JAIDS-JOURNAL OF ACQUIRED IMMUNE DEFICIENCY SYNDROMES
- High prevalence of amantadine resistance among circulating European porcine influenza A viruses
- (2009) A. Krumbholz et al. JOURNAL OF GENERAL VIROLOGY
- Demonstration of Sustained Drug-Resistant Human Immunodeficiency Virus Type 1 Lineages Circulating among Treatment-Naive Individuals
- (2009) S. Hue et al. JOURNAL OF VIROLOGY
- Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic
- (2009) Gavin J. D. Smith et al. NATURE
- Triple-Reassortant Swine Influenza A (H1) in Humans in the United States, 2005–2009
- (2009) Vivek Shinde et al. NEW ENGLAND JOURNAL OF MEDICINE
- Emergence of a Novel Swine-Origin Influenza A (H1N1) Virus in Humans
- (2009) NEW ENGLAND JOURNAL OF MEDICINE
- Emergency of Primary NNRTI Resistance Mutations without Antiretroviral Selective Pressure in a HAART-Treated Child
- (2009) Elizabeth S. Machado et al. PLoS One
- Uniting Alignments and Trees
- (2009) A. Loytynoja et al. SCIENCE
- Rapid and Accurate Large-Scale Coestimation of Sequence Alignments and Phylogenetic Trees
- (2009) K. Liu et al. SCIENCE
- Genetic variation in mother???child acute seroconverter pairs from Zambia
- (2008) Federico G Hoffmann et al. AIDS
- The molecular epidemiology of HIV-1 envelope diversity during HIV-1 subtype C vertical transmission in Malawian mother???infant pairs
- (2008) Jesse J Kwiek et al. AIDS
- Prevalence of Nevirapine-Associated Resistance Mutations after Single Dose Prophylactic Treatment among Antenatal Clinic Attendees in North Rift Kenya
- (2008) Michael Kiptoo et al. AIDS RESEARCH AND HUMAN RETROVIRUSES
- Antiretroviral Drug Resistance Testing in Adult HIV‐1 Infection: 2008 Recommendations of an International AIDS Society–USA Panel
- (2008) Martin S. Hirsch et al. CLINICAL INFECTIOUS DISEASES
- Positive selection operates continuously on hemagglutinin during evolution of H3N2 human influenza A virus
- (2008) Yoshiyuki Suzuki GENE
- Generations of sequencing technologies
- (2008) Erik Pettersson et al. GENOMICS
- Evolution of drug resistance in multiple distinct lineages of H5N1 avian influenza
- (2008) Andrew W. Hill et al. INFECTION GENETICS AND EVOLUTION
- Evolutionary dynamics of human and avian metapneumoviruses
- (2008) M. de Graaf et al. JOURNAL OF GENERAL VIROLOGY
- Nevirapine Resistance in Women and Infants after First versus Repeated Use of Single‐Dose Nevirapine for Prevention of HIV‐1 Vertical Transmission
- (2008) Tamara S. Flys et al. JOURNAL OF INFECTIOUS DISEASES
- Analysis of Nevirapine (NVP) Resistance in Ugandan Infants Who Were HIV Infected Despite Receiving Single-Dose (SD) NVP versus SD NVP Plus Daily NVP Up to 6 Weeks of Age to Prevent HIV Vertical Transmission
- (2008) Jessica D. Church et al. JOURNAL OF INFECTIOUS DISEASES
- Managing Antiretroviral Therapy: Changing Regimens, Resistance Testing, and the Risks from Structured Treatment Interruptions
- (2008) Joseph J. Eron JOURNAL OF INFECTIOUS DISEASES
- Initiating Therapy: When to Start, What to Use
- (2008) Martin S. Hirsch JOURNAL OF INFECTIOUS DISEASES
- HIV‐1 Subtype as a Determinant of Disease Progression
- (2008) Daniel R. Kuritzkes JOURNAL OF INFECTIOUS DISEASES
- HIV‐1 Variation before Seroconversion in Men Who Have Sex with Men: Analysis of Acute/Early HIV Infection in the Multicenter AIDS Cohort Study
- (2008) Geoffrey S. Gottlieb et al. JOURNAL OF INFECTIOUS DISEASES
- Effect of Human Immunodeficiency Virus Type 1 (HIV‐1) Subtype on Disease Progression in Persons from Rakai, Uganda, with Incident HIV‐1 Infection
- (2008) Noah Kiwanuka et al. JOURNAL OF INFECTIOUS DISEASES
- Keeping Up With the Next Generation
- (2008) John R. ten Bosch et al. JOURNAL OF MOLECULAR DIAGNOSTICS
- A Bioinformatician's Guide to Metagenomics
- (2008) V. Kunin et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- A Maximum Likelihood Method for Detecting Directional Evolution in Protein Sequences and Its Application to Influenza A Virus
- (2008) S. L. Kosakovsky Pond et al. MOLECULAR BIOLOGY AND EVOLUTION
- The complete genome of an individual by massively parallel DNA sequencing
- (2008) David A. Wheeler et al. NATURE
- The genomic and epidemiological dynamics of human influenza A virus
- (2008) Andrew Rambaut et al. NATURE
- Influenza A H5N1 Immigration Is Filtered Out at Some International Borders
- (2008) Robert G. Wallace et al. PLoS One
- Seasonality of Influenza A(H3N2) Virus: A Hong Kong Perspective (1997–2006)
- (2008) Julian W. Tang et al. PLoS One
- Directionality in the evolution of influenza A haemagglutinin
- (2008) S. Kryazhimskiy et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- The Global Circulation of Seasonal Influenza A (H3N2) Viruses
- (2008) C. A. Russell et al. SCIENCE
- Frequent inter-species transmission and geographic subdivision in avian influenza viruses from wild birds
- (2008) Rubing Chen et al. VIROLOGY
- Evolutionary and Transmission Dynamics of Reassortant H5N1 Influenza Virus in Indonesia
- (2008) Tommy Tsan-Yuk Lam et al. PLoS Pathogens
- Multiple Reassortment Events in the Evolutionary History of H1N1 Influenza A Virus Since 1918
- (2008) Martha I. Nelson et al. PLoS Pathogens
- Evolutionary Dynamics and Emergence of Panzootic H5N1 Influenza Viruses
- (2008) Dhanasekaran Vijaykrishna et al. PLoS Pathogens
- Comments to the predecessor of human SARS coronavirus in 2003–2004 epidemic
- (2007) Tommy Tsan-Yuk Lam et al. VETERINARY MICROBIOLOGY
- Evolutionary analyses of European H1N2 swine influenza A virus by placing timestamps on the multiple reassortment events
- (2007) Tsan-Yuk Lam et al. VIRUS RESEARCH
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started