Epigenetic virtues of chromodomains

Novel Mi-2 related ATP-dependent chromatin remodelers

(2014) Natascha Kunert et al.   Epigenetics

Epigenetics in Alternative Pre-mRNA Splicing

(2011) Reini F. Luco et al.   CELL

Regulation of chromatin by histone modifications

(2011) Andrew J Bannister et al.   CELL RESEARCH

The HP1a Disordered C Terminus and Chromo Shadow Domain Cooperate to Select Target Peptide Partners

(2011) Deanna L. Mendez et al.   CHEMBIOCHEM

Plant Homeodomain (PHD) Fingers of CHD4 Are Histone H3-binding Modules with Preference for Unmodified H3K4 and Methylated H3K9

(2011) Robyn E. Mansfield et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Synthetic Reversal of Epigenetic Silencing

(2011) Karmella A. Haynes et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Structural Insights for MPP8 Chromodomain Interaction with Histone H3 Lysine 9: Potential Effect of Phosphorylation on Methyl-Lysine Binding

(2011) Yanqi Chang et al.   JOURNAL OF MOLECULAR BIOLOGY

N-Terminal Phosphorylation of HP1  Promotes Its Chromatin Binding

(2011) K. Hiragami-Hamada et al.   MOLECULAR AND CELLULAR BIOLOGY

Chromodomain-Mediated Oligomerization of HP1 Suggests a Nucleosome-Bridging Mechanism for Heterochromatin Assembly

(2011) Daniele Canzio et al.   MOLECULAR CELL

Control of Flowering and Cell Fate by LIF2, an RNA Binding Partner of the Polycomb Complex Component LHP1

(2011) David Latrasse et al.   PLoS One

The C-Terminal Domain of RNA Polymerase II Is Modified by Site-Specific Methylation

(2011) R. J. Sims et al.   SCIENCE

Emerging role of the MORF/MRG gene family in various biological processes, including aging

(2010) Meizhen Chen et al.   Annals of the New York Academy of Sciences

Phosphorylation of the chromodomain changes the binding specificity of Cbx2 for methylated histone H3

(2010) Atsushi Hatano et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Retinoblastoma binding protein-1 (RBP1) is a Runx2 coactivator and promotes osteoblastic differentiation

(2010) David G Monroe et al.   BMC MUSCULOSKELETAL DISORDERS

MYST-family histone acetyltransferases: beyond chromatin

(2010) Vasileia Sapountzi et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

The ATP-dependent chromatin remodeling enzyme CHD7 regulates pro-neural gene expression and neurogenesis in the inner ear

(2010) E. A. Hurd et al.   DEVELOPMENT

Methyl-H3K9-binding protein MPP8 mediates E-cadherin gene silencing and promotes tumour cell motility and invasion

(2010) Kenji Kokura et al.   EMBO JOURNAL

A phospho/methyl switch at histone H3 regulates TFIID association with mitotic chromosomes

(2010) Radhika A Varier et al.   EMBO JOURNAL

Structural basis for methylarginine-dependent recognition of Aubergine by Tudor

(2010) H. Liu et al.   GENES & DEVELOPMENT

A chromodomain switch mediated by histone H3 Lys 4 acetylation regulates heterochromatin assembly

(2010) B. Xhemalce et al.   GENES & DEVELOPMENT

A Dynamic cpSRP43-Albino3 Interaction Mediates Translocase Regulation of Chloroplast Signal Recognition Particle (cpSRP)-targeting Components

(2010) Nathaniel E. Lewis et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Structural and Biochemical Studies on the Chromo-barrel Domain of Male Specific Lethal 3 (MSL3) Reveal a Binding Preference for Mono- or Dimethyllysine 20 on Histone H4

(2010) Stanley A. Moore et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Recognition and Specificity Determinants of the Human Cbx Chromodomains

(2010) Lilia Kaustov et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

MRG15 binds directly to PALB2 and stimulates homology-directed repair of chromosomal breaks

(2010) T. Hayakawa et al.   JOURNAL OF CELL SCIENCE

MOF and Histone H4 Acetylation at Lysine 16 Are Critical for DNA Damage Response and Double-Strand Break Repair

(2010) G. G. Sharma et al.   MOLECULAR AND CELLULAR BIOLOGY

MOF and H4 K16 Acetylation Play Important Roles in DNA Damage Repair by Modulating Recruitment of DNA Damage Repair Protein Mdc1

(2010) X. Li et al.   MOLECULAR AND CELLULAR BIOLOGY

Highly Compacted Chromatin Formed In Vitro Reflects the Dynamics of Transcription Activation In Vivo

(2010) Guohong Li et al.   MOLECULAR CELL

TDRD3 Is an Effector Molecule for Arginine-Methylated Histone Marks

(2010) Yanzhong Yang et al.   MOLECULAR CELL

Molecular Interplay of the Noncoding RNA ANRIL and Methylated Histone H3 Lysine 27 by Polycomb CBX7 in Transcriptional Silencing of INK4a

(2010) Kyoko L. Yap et al.   MOLECULAR CELL

The Chromodomains of the Chd1 Chromatin Remodeler Regulate DNA Access to the ATPase Motor

(2010) Glenn Hauk et al.   MOLECULAR CELL

Chromatin remodelling during development

(2010) Lena Ho et al.   NATURE

CHD7 cooperates with PBAF to control multipotent neural crest formation

(2010) Ruchi Bajpai et al.   NATURE

Relationship between nucleosome positioning and DNA methylation

(2010) Ramakrishna K. Chodavarapu et al.   NATURE

Combinatorial profiling of chromatin binding modules reveals multisite discrimination

(2010) Adam L Garske et al.   Nature Chemical Biology

Molecular basis of histone H3K36me3 recognition by the PWWP domain of Brpf1

(2010) Alessandro Vezzoli et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Corecognition of DNA and a methylated histone tail by the MSL3 chromodomain

(2010) Daesung Kim et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The chromodomains of CHD1 are critical for enzymatic activity but less important for chromatin localization

(2010) Stefano Morettini et al.   NUCLEIC ACIDS RESEARCH

Conservation and divergence of methylation patterning in plants and animals

(2010) S. Feng et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular Signals of Epigenetic States

(2010) Roberto Bonasio et al.   SCIENCE

Epigenetic Reprogramming in Plant and Animal Development

(2010) Suhua Feng et al.   SCIENCE

Regulation of Alternative Splicing by Histone Modifications

(2010) R. F. Luco et al.   SCIENCE

Binding of the CHD4 PHD2 finger to histone H3 is modulated by covalent modifications

(2009) Catherine A. Musselman et al.   BIOCHEMICAL JOURNAL

Umbrea, a chromo shadow domain protein in Drosophila melanogaster heterochromatin, interacts with Hip, HP1 and HOAP

(2009) Christian Joppich et al.   CHROMOSOME RESEARCH

The structure–function link of compensated chromatin in Drosophila

(2009) John C Lucchesi   CURRENT OPINION IN GENETICS & DEVELOPMENT

Regulation of Floral Patterning by Flowering Time Genes

(2009) Chang Liu et al.   DEVELOPMENTAL CELL

Rice cytosine DNA methyltransferases - gene expression profiling during reproductive development and abiotic stress

(2009) Rita Sharma et al.   FEBS Journal

Genomic distribution of CHD7 on chromatin tracks H3K4 methylation patterns

(2009) M. P. Schnetz et al.   GENOME RESEARCH

The C Terminus of the Alb3 Membrane Insertase Recruits cpSRP43 to the Thylakoid Membrane

(2009) Sebastian Falk et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Multimerization and H3K9me3 Binding Are Required for CDYL1b Heterochromatin Association

(2009) Henriette Franz et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Characterization of the N-Terminal Tail Domain of Histone H3 in Condensed Nucleosome Arrays by Hydrogen Exchange and NMR

(2009) Hidenori Kato et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

High-Affinity Binding of Chp1 Chromodomain to K9 Methylated Histone H3 Is Required to Establish Centromeric Heterochromatin

(2009) Thomas Schalch et al.   MOLECULAR CELL

JAK2 phosphorylates histone H3Y41 and excludes HP1α from chromatin

(2009) Mark A. Dawson et al.   NATURE

Histone H3 methylation links DNA damage detection to activation of the tumour suppressor Tip60

(2009) Yingli Sun et al.   NATURE CELL BIOLOGY

In Brief

(2009)   NATURE REVIEWS NEUROSCIENCE

Methylation-state-specific recognition of histones by the MBT repeat protein L3MBTL2

(2009) Yahong Guo et al.   NUCLEIC ACIDS RESEARCH

A homogeneous method for investigation of methylation-dependent protein-protein interactions in epigenetics

(2009) A. M. Quinn et al.   NUCLEIC ACIDS RESEARCH

The chromatin remodeling factor CHD8 interacts with elongating RNA polymerase II and controls expression of the cyclin E2 gene

(2009) M. Rodríguez-Paredes et al.   NUCLEIC ACIDS RESEARCH

Interplay between SCARECROW, GA and LIKE HETEROCHROMATIN PROTEIN 1 in ground tissue patterning in the Arabidopsis root

(2009) Hongchang Cui et al.   PLANT JOURNAL

Epigenome Microarray Platform for Proteome-Wide Dissection of Chromatin-Signaling Networks

(2009) Dennis J. Bua et al.   PLoS One

Talking to chromatin: post-translational modulation of polycomb group function

(2009) Hanneke EC Niessen et al.   Epigenetics & Chromatin

Epigenetic regulation: methylation of histone and non-histone proteins

(2009) Fei Lan et al.   Science in China. Series C, Life sciences / Chinese Academy of Sciences

Dynamic nuclear reorganization during genome remodeling of Tetrahymena

(2008) Douglas L. Chalker   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

A Sequence Motif within Chromatin Entry Sites Directs MSL Establishment on the Drosophila X Chromosome

(2008) Artyom A. Alekseyenko et al.   CELL

Mechanisms and structures of crotonase superfamily enzymes – How nature controls enolate and oxyanion reactivity

(2008) R. B. Hamed et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

The emerging field of dynamic lysine methylation of non-histone proteins

(2008) Jing Huang et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Chromodomains direct integration of retrotransposons to heterochromatin

(2008) X. Gao et al.   GENOME RESEARCH

Specificity of the Chromodomain Y Chromosome Family of Chromodomains for Lysine-methylated ARK(S/T) Motifs

(2008) Wolfgang Fischle et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Molecular Basis of the Interaction ofSaccharomyces cerevisiaeEaf3 Chromo Domain with Methylated H3K36

(2008) Bingfa Sun et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Novel Structural and Functional Mode of a Knot Essential for RNA Binding Activity of the Esa1 Presumed Chromodomain

(2008) Hideaki Shimojo et al.   JOURNAL OF MOLECULAR BIOLOGY

Identification of Chromatin Remodeling Genes Arid4a and Arid4b as Leukemia Suppressor Genes

(2008) M.-Y. Wu et al.   JNCI-Journal of the National Cancer Institute

Balance between Distinct HP1 Family Proteins Controls Heterochromatin Assembly in Fission Yeast

(2008) M. Sadaie et al.   MOLECULAR AND CELLULAR BIOLOGY

Different Genetic Functions for the Rpd3(L) and Rpd3(S) Complexes Suggest Competition between NuA4 and Rpd3(S)

(2008) D. Biswas et al.   MOLECULAR AND CELLULAR BIOLOGY

Direct Interaction between DNA Methyltransferase DIM-2 and HP1 Is Required for DNA Methylation in Neurospora crassa

(2008) S. Honda et al.   MOLECULAR AND CELLULAR BIOLOGY

Heterochromatin Protein 1a Stimulates Histone H3 Lysine 36 Demethylation by the Drosophila KDM4A Demethylase

(2008) Chia-Hui Lin et al.   MOLECULAR CELL

HP1 Proteins Form Distinct Complexes and Mediate Heterochromatic Gene Silencing by Nonoverlapping Mechanisms

(2008) Mohammad R. Motamedi et al.   MOLECULAR CELL

HP1-β mobilization promotes chromatin changes that initiate the DNA damage response

(2008) Nabieh Ayoub et al.   NATURE

Cell cycle control of centromeric repeat transcription and heterochromatin assembly

(2008) Ee Sin Chen et al.   NATURE

Combinatorial patterns of histone acetylations and methylations in the human genome

(2008) Zhibin Wang et al.   NATURE GENETICS

Roles of the Clr4 methyltransferase complex in nucleation, spreading and maintenance of heterochromatin

(2008) Ke Zhang et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The MSL3 chromodomain directs a key targeting step for dosage compensation of the Drosophila melanogaster X chromosome

(2008) Tuba H Sural et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

SMART 6: recent updates and new developments

(2008) I. Letunic et al.   NUCLEIC ACIDS RESEARCH

InterPro: the integrative protein signature database

(2008) S. Hunter et al.   NUCLEIC ACIDS RESEARCH

Centromeric Aurora-B Activation Requires TD-60, Microtubules, and Substrate Priming Phosphorylation

(2008) S. E. Rosasco-Nitcher et al.   SCIENCE

Structural Basis for the Recognition of Methylated Histone H3K36 by the Eaf3 Subunit of Histone Deacetylase Complex Rpd3S

(2008) Chao Xu et al.   STRUCTURE