Description of a novel pectin-degrading bacterial species Prevotella pectinovora sp. nov., based on its phenotypic and genomic traits

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

Pyrosequencing-based analysis of fecal microbial communities in three purebred pig lines

(2014) Edward Alain B. Pajarillo et al.   JOURNAL OF MICROBIOLOGY

Database resources of the National Center for Biotechnology Information

(2014)   NUCLEIC ACIDS RESEARCH

The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

RefSeq microbial genomes database: new representation and annotation strategy

(2013) Tatiana Tatusova et al.   NUCLEIC ACIDS RESEARCH

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

dbCAN: a web resource for automated carbohydrate-active enzyme annotation

(2012) Yanbin Yin et al.   NUCLEIC ACIDS RESEARCH

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Comparative fecal metagenomics unveils unique functional capacity of the swine gut

(2011) Regina Lamendella et al.   BMC MICROBIOLOGY

Identification and classification of the genus Bacteroides by multilocus sequence analysis

(2011) M. Sakamoto et al.   MICROBIOLOGY-SGM

Longitudinal investigation of the age-related bacterial diversity in the feces of commercial pigs

(2011) Hyeun Bum Kim et al.   VETERINARY MICROBIOLOGY

New insights intoPrevotelladiversity and medical microbiology

(2010) Corentine Alauzet et al.   Future Microbiology

Xylan degradation, a metabolic property shared by rumen and human colonic Bacteroidetes

(2010) Dylan Dodd et al.   MOLECULAR MICROBIOLOGY

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

(2010) C. De Filippo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Shifting the genomic gold standard for the prokaryotic species definition

(2009) Michael Richter et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Improved real-time PCR assays for the detection of fecal indicator bacteria in surface waters with different instrument and reagent systems

(2008) S. Siefring et al.   JOURNAL OF WATER AND HEALTH

The All-Species Living Tree project: A 16S rRNA-based phylogenetic tree of all sequenced type strains

(2008) Pablo Yarza et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY