Role of Caribbean Islands in the diversification and biogeography of NeotropicalHeraclidesswallowtails

Exploring the combined role of eustasy and oceanic island thermal subsidence in shaping biodiversity on the Galápagos

(2014) Jason R. Ali et al.   JOURNAL OF BIOGEOGRAPHY

Explaining Andean megadiversity: the evolutionary and ecological causes of glassfrog elevational richness patterns

(2013) Carl R. Hutter et al.   ECOLOGY LETTERS

Macroevolutionary perspectives to environmental change

(2013) Fabien L. Condamine et al.   ECOLOGY LETTERS

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Biogeographic and diversification patterns of Neotropical Troidini butterflies (Papilionidae) support a museum model of diversity dynamics for Amazonia

(2012) Fabien L Condamine et al.   BMC EVOLUTIONARY BIOLOGY

Temporal and spatial origin of Gesneriaceae in the New World inferred from plastid DNA sequences

(2012) Mathieu Perret et al.   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

Fine-scale biogeographical and temporal diversification processes of peacock swallowtails (PapiliosubgenusAchillides) in the Indo-Australian Archipelago

(2012) Fabien L. Condamine et al.   CLADISTICS

What causes latitudinal gradients in species diversity? Evolutionary processes and ecological constraints on swallowtail biodiversity

(2012) Fabien L. Condamine et al.   ECOLOGY LETTERS

Global biogeographical pattern of swallowtail diversification demonstrates alternative colonization routes in the Northern and Southern hemispheres

(2012) Fabien L. Condamine et al.   JOURNAL OF BIOGEOGRAPHY

Global patterns of amphibian phylogenetic diversity

(2012) Susanne A. Fritz et al.   JOURNAL OF BIOGEOGRAPHY

Accurate Model Selection of Relaxed Molecular Clocks in Bayesian Phylogenetics

(2012) Guy Baele et al.   MOLECULAR BIOLOGY AND EVOLUTION

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

Disentangling dispersal, vicariance and adaptive radiation patterns: A case study using armyworms in the pest genus Spodoptera (Lepidoptera: Noctuidae)

(2012) Gael J. Kergoat et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Systematics and evolutionary history of butterflies in the “Taygetis clade” (Nymphalidae: Satyrinae: Euptychiina): Towards a better understanding of Neotropical biogeography

(2012) Pável F. Matos-Maraví et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The global diversity of birds in space and time

(2012) W. Jetz et al.   NATURE

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

Multiple Continental Radiations and Correlates of Diversification in Lupinus (Leguminosae): Testing for Key Innovation with Incomplete Taxon Sampling

(2012) Christopher S. Drummond et al.   SYSTEMATIC BIOLOGY

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Phylogenetic Methods in Biogeography

(2011) Fredrik Ronquist et al.   Annual Review of Ecology Evolution and Systematics

Origin and global diversification patterns of tropical rain forests: inferences from a complete genus-level phylogeny of palms

(2011) Thomas LP Couvreur et al.   BMC BIOLOGY

Colonizing the Caribbean: is the GAARlandia land-bridge hypothesis gaining a foothold?

(2011) Jason R. Ali   JOURNAL OF BIOGEOGRAPHY

Temporal patterns of diversification in Andean Eois, a species-rich clade of moths (Lepidoptera, Geometridae)

(2011) P. STRUTZENBERGER et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Major global radiation of corvoid birds originated in the proto-Papuan archipelago

(2011) K. A. Jonsson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Inferring speciation and extinction processes from extant species data

(2011) T. Stadler   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reconciling molecular phylogenies with the fossil record

(2011) H. Morlon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Diversity-dependence brings molecular phylogenies closer to agreement with the fossil record

(2011) R. S. Etienne et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Testing the Impact of Calibration on Molecular Divergence Times Using a Fossil-Rich Group: The Case of Nothofagus (Fagales)

(2011) Hervé Sauquet et al.   SYSTEMATIC BIOLOGY

Phylogenetic Insights on Adaptive Radiation

(2010) Richard E. Glor   Annual Review of Ecology Evolution and Systematics

Picante: R tools for integrating phylogenies and ecology

(2010) S. W. Kembel et al.   BIOINFORMATICS

Do model-based phylogenetic analyses perform better than parsimony? A test with empirical data

(2010) Eirik Rindal et al.   CLADISTICS

Phylogenetics and divergence times of Papilioninae (Lepidoptera) with special reference to the enigmatic genera Teinopalpus and Meandrusa

(2010) Thomas J. Simonsen et al.   CLADISTICS

Patterns and timing of diversification in a tropical montane butterfly genus, Lymanopoda (Nymphalidae, Satyrinae)

(2010) Kayce L. Casner et al.   ECOGRAPHY

Rapid diversification and not clade age explains high diversity in neotropical Adelpha butterflies

(2010) S. P. Mullen et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Amazonia Through Time: Andean Uplift, Climate Change, Landscape Evolution, and Biodiversity

(2010) C. Hoorn et al.   SCIENCE

The Origins of C4 Grasslands: Integrating Evolutionary and Ecosystem Science

(2010) E. J. Edwards et al.   SCIENCE

Improving Marginal Likelihood Estimation for Bayesian Phylogenetic Model Selection

(2010) Wangang Xie et al.   SYSTEMATIC BIOLOGY

Slowdowns in Diversification Rates from Real Phylogenies May Not be Real

(2010) Natalie Cusimano et al.   SYSTEMATIC BIOLOGY

Late Miocene onset of the Amazon River and the Amazon deep-sea fan: Evidence from the Foz do Amazonas Basin

(2009) J. Figueiredo et al.   GEOLOGY

Out of the Andes: patterns of diversification in clearwing butterflies

(2009) M. ELIAS et al.   MOLECULAR ECOLOGY

Repeated climate-linked host shifts have promoted diversification in a temperate clade of leaf-mining flies

(2009) I. S. Winkler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Tracing the impact of the Andean uplift on Neotropical plant evolution

(2009) A. Antonelli et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates

(2009) M. E. Alfaro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

New Guinea highland origin of a widespread arthropod supertramp

(2009) M. Balke et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Accounting for Calibration Uncertainty in Phylogenetic Estimation of Evolutionary Divergence Times

(2009) Simon Y. W. Ho et al.   SYSTEMATIC BIOLOGY

Recent Long-Distance Dispersal Overshadows Ancient Biogeographical Patterns in a Pantropical Angiosperm Family (Simaroubaceae, Sapindales)

(2009) Joshua W. Clayton et al.   SYSTEMATIC BIOLOGY

Amazonian Amphibian Diversity Is Primarily Derived from Late Miocene Andean Lineages

(2009) Juan C Santos et al.   PLOS BIOLOGY

TNT, a free program for phylogenetic analysis

(2008) Pablo A. Goloboff et al.   CLADISTICS

An early Cenozoic perspective on greenhouse warming and carbon-cycle dynamics

(2008) James C. Zachos et al.   NATURE

Rise of the Andes

(2008) C. N. Garzione et al.   SCIENCE

Long-Term Sea-Level Fluctuations Driven by Ocean Basin Dynamics

(2008) R. D. Muller et al.   SCIENCE

Maximum Likelihood Inference of Geographic Range Evolution by Dispersal, Local Extinction, and Cladogenesis

(2008) Richard H. Ree et al.   SYSTEMATIC BIOLOGY

Are islands the end of the colonization road?

(2008) E BELLEMAIN et al.   TRENDS IN ECOLOGY & EVOLUTION

Density-Dependent Cladogenesis in Birds

(2008) Albert B Phillimore et al.   PLOS BIOLOGY