Article
Biochemistry & Molecular Biology
Paula Arribas, Carmelo Andujar, Antonia Salces-Castellano, Brent C. Emerson, Alfried P. Vogler
Summary: Research using high-throughput sequencing analyzed soil arthropod communities in three Iberian mountain regions, identifying significant differences in local assemblage composition between grasslands and forests. The study revealed a self-similar distance decay pattern across different hierarchical levels, suggesting that limited dispersal processes shape community assembly at the local scale. These findings provide insight into how dispersal limitations influence mesofauna community structure and may challenge current estimations of total arthropod diversity on Earth.
Article
Ecology
Inaki Odriozola, Tijana Martinovic, Tereza Masinova, Barbara Doreen Bahnmann, Antonin Machac, Petr Sedlak, Michal Tomsovsky, Petr Baldrian
Summary: The composition and drivers of fungal communities in Czech Republic were studied, revealing that ectomycorrhizal fungi and saprotrophs are influenced by vegetation and dispersal at local scales, while yeasts show little distance decay and exhibit spatial homogeneity.
GLOBAL ECOLOGY AND BIOGEOGRAPHY
(2023)
Article
Computer Science, Information Systems
Xiaojing Yao, Xufeng Jiang, Dacheng Wang, Lina Yang, Ling Peng, Tianhe Chi
Summary: This paper proposes an efficient maximal co-location mining algorithm with directed road-network constraints and spatial-continuity consideration (CMDS) for extracting useful spatial co-location patterns from urban service facilities efficiently and accurately.
INFORMATION SCIENCES
(2021)
Article
Ecology
Justin Kitzes, Micah Brush, Kyle Walters
Summary: This study demonstrates the relationship between species-level spatial patterns and their quantitative derivations, providing a mathematical framework, theoretical examples, simulation study, and empirical analysis. It discusses the importance of supporting ecological theory testing, efficient field sampling schemes, and laying the groundwork for future unified theories of community-level spatial metrics and multi-patch spatial patterns.
Article
Environmental Studies
Kun Gao, Ying Yang, Aoyong Li, Xiaobo Qu
Summary: This study empirically estimates the distance decay patterns of using dockless bike-sharing systems (DLBS) in Shanghai, China, based on massive transaction record data and reveals spatial heterogeneity in distance decay across different urban contexts. The study also investigates the associations of distance decay with built environment factors and finds significant correlations with factors such as population density, land use entropy, and road network density. Additionally, the study reveals spatial divergences in the influences of built environment factors on distance decay in different urban contexts.
TRANSPORTATION RESEARCH PART D-TRANSPORT AND ENVIRONMENT
(2021)
Article
Ecology
Huimin Xu, Jin Zeng, Chaoran Li, Dayong Zhao, Rujia He, Qinglong L. Wu
Summary: This study investigated the characteristics, spatial distribution, and assembly processes of free-living and particle-attached bacterial communities in lakeshore zones in different regions. The results showed that lifestyle and regional differences both have an impact on bacterial communities. Dispersal limitation was found to be an important process influencing the spatial distribution of bacterial communities.
FRESHWATER BIOLOGY
(2021)
Article
Multidisciplinary Sciences
Jialing Teng, Jing Tian, Guirui Yu, Yakov Kuzyakov
Summary: The study found that spatial heterogeneity of soil bacterial community varies across scales, with clear spatial patterns in both bacterial community composition and metabolic functions. Environmental variables and geographic distance together explained a significant proportion of the community and metabolic functions, highlighting the importance of factors such as soil organic carbon and root biomass in shaping bacterial community structure and metabolic functions.
Review
Computer Science, Information Systems
Karim Malik, Colin Robertson, Steven A. Roberts, Tarmo K. Remmel, Jed A. Long
Summary: This paper reviews the use of computer vision models and artificial neural networks in geographical analysis, with a focus on the representation and comparison of spatial patterns. The authors find that scale, which is typically considered a model parameter in computer vision, is a contextual element in geographical research. However, convolutional neural networks (CNNs) are relatively robust to small-scale variations due to their ability to learn multiscale features. Although there are still challenges in parameterizing computer vision models to represent multiscale patterns, a typology of scales can provide a framework for guidelines in a geographic context.
INTERNATIONAL JOURNAL OF GEOGRAPHICAL INFORMATION SCIENCE
(2023)
Article
Urban Studies
Minxuan Lan, Lin Liu, John E. Eck
Summary: The study found that a casino has different impacts on property crime and violent crime, with property crime fluctuating in the neighboring area of the casino before and after its opening, while the overall trend of property crime in the city is decreasing. Meanwhile, there was a slight increase in violent crime density after the casino opened, but it later dropped back to pre-casino levels.
Article
Astronomy & Astrophysics
Farnik Nikakhtar, Ravi K. Sheth, Idit Zehavi
Summary: This paper examines the relationship between the evolved two-point correlation function of biased tracers and the initial correlation function on large scales, proposing a fast and accurate reconstruction algorithm. It demonstrates how this method can estimate the width of the smearing kernel from the same dataset and provide error estimates on the value of the distance scale, regardless of specific cosmological models. The study also shows the potential for further speed-ups in cosmological analyses by using constraints on the smearing scale from other datasets during the reconstruction process.
Article
Multidisciplinary Sciences
Christian Santos-Medellin, Katerina Estera-Molina, Mengting Yuan, Jennifer Pett-Ridge, Mary K. Firestone, Joanne B. Emerson
Summary: This study analyzed soil viromes from a Mediterranean grassland in California and found that viral community composition exhibited a significant distance-decay relationship within the field site. The study also revealed differences in the spatial structuring of viral and prokaryotic communities and the ability of soil virosphere to rapidly respond to changing environmental conditions.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2022)
Article
Environmental Studies
Jose M. Martinez-Paz, Jose A. Albaladejo-Garcia, Jesus Barreiro-Hurle, Federico Martinez-Carrasco Pleite, Angel Perni
Summary: This study aims to analyze and determine the economic value and acceptability of the restoration project, considering spatial effects. It is found that the distance to project and substitute areas explains WTP and PB, recommending interventions to be targeted at areas with high accessibility and low number of substitutes for maximizing benefits.
Article
Environmental Sciences
Han Wang, Qiwen Zheng, Shuang Li, Xiaoyu Yang
Summary: This study introduces the concept of geographical accessibility and a two-step mobile search model to demonstrate the external spatial spillover effect of ecological externalities. It found that the change in the spillover mechanism of ecological externalities is not only influenced by spatial distance but also by the pro-environmental attributes of individual residents around the region, with residents highly interacting with ecological protection zones showing a stronger spillover effect.
FRONTIERS IN MARINE SCIENCE
(2021)
Review
Ecology
Mitchel L. M. Rudge, Shaun R. Levick, Renee E. Bartolo, Peter D. Erskine
Summary: This article explores practical options for creating landscape-scale forest restoration targets that embrace spatial pattern. Hierarchy theory, satellite remote sensing, landscape pattern analysis, drone-based remote sensing, and spatial point pattern analysis are all useful tools for assessing and quantifying the spatial pattern of reference landscapes and informing forest restoration targets.
Article
Biochemistry & Molecular Biology
Kel Cook, Jyotsna Sharma, Andrew D. Taylor, Ian Herriott, D. Lee Taylor
Summary: This study explored the spatial structure and substrate specificity of fungal communities in the canopy of a Costa Rican tropical rainforest. The results showed significant positive spatial autocorrelation and distance decay of similarity of fungal communities at small scales, with high turnover and low similarity among samples. The composition and diversity of fungal communities varied among substrate types.
Article
Ecology
Hong Qian, Richard Field, Jin-Long Zhang, Jian Zhang, Shengbin Chen
JOURNAL OF BIOGEOGRAPHY
(2016)
Article
Ecology
Gang Feng, Ziyu Ma, Blas M. Benito, Signe Normand, Alejandro Ordonez, Yi Jin, Lingfeng Mao, Jens-Christian Svenning
GLOBAL ECOLOGY AND BIOGEOGRAPHY
(2017)
Article
Multidisciplinary Sciences
Hong Qian, Shengbin Chen, Jin-Long Zhang
SCIENTIFIC REPORTS
(2017)
Article
Biodiversity Conservation
Lingfeng Mao, Nathan G. Swenson, Xinghua Sui, Jinlong Zhang, Shengbin Chen, Jingji Li, Peihao Peng, Guangsheng Zhou, Xinshi Zhang
BIODIVERSITY AND CONSERVATION
(2020)
Article
Biodiversity Conservation
Sawaid Abbas, Janet E. Nichol, Jinlong Zhang, Gunter A. Fischer
ECOLOGICAL INDICATORS
(2019)
Article
Multidisciplinary Sciences
Shan Xu, Jordi Sardans, Jinlong Zhang, Josep Penuelas
SCIENTIFIC REPORTS
(2020)
Article
Biology
Shan Xu, Nico Eisenhauer, Olga Ferlian, Jinlong Zhang, Guoyi Zhou, Xiankai Lu, Chengshuai Liu, Deqiang Zhang
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
(2020)
Article
Environmental Sciences
Sawaid Abbas, Janet E. Nichol, Jinlong Zhang, Gunter A. Fischer, Man Sing Wong, Syed M. Irteza
Summary: The restoration and functioning of tropical secondary forests are crucial for the ecosystem. Species richness rapidly increases after about 15 years, but is lower in old-growth forests.
SCIENCE OF THE TOTAL ENVIRONMENT
(2021)
Article
Ecology
Yue Xu, Zehao Shen, Jinlong Zhang, Runguo Zang, Youxu Jiang
Summary: This study used a phylogenetic and biogeographic approach with Chinese evergreen broad-leaved woody plants to examine the impact of short- and long-term climate variability on plant biodiversity patterns. Results showed that both short- and long-term climate variability play important roles, with historical climate changes still influencing current biodiversity patterns. Differences in the effects of historical and current climate among different growth forms emphasize the critical role of growth forms in predicting vegetation response to climate change.
FRONTIERS IN ECOLOGY AND EVOLUTION
(2021)
Editorial Material
Ecology
Zehao Shen, George P. Malanson, Meng Yao, Jinlong Zhang
FRONTIERS IN ECOLOGY AND EVOLUTION
(2021)
Article
Plant Sciences
Bo Liu, Jin-Long Zhang, Matthew K. Lau, Xu-Gao Wang, Yu Liang, Tian-Xiao Ma
Summary: Functional traits have impacts on species interactions, community composition, and ecosystem functioning. This study focused on the diversification and phylogenetic correlation of multiple functional traits in boreal forest understory species in northeast China. The results showed low levels of phylogenetic niche conservatism, indicating divergence of functional traits among co-occurring understory species. Additionally, both positive and negative phylogenetic correlations were found among the measured functional traits, suggesting adaptations to resource acquisition strategies. This study provides evidence that divergence in functional traits reflects understory adaptions to boreal conditions.
JOURNAL OF SYSTEMATICS AND EVOLUTION
(2023)
Article
Ecology
Jiangshan Lai, Yi Zou, Jinlong Zhang, Pedro R. Peres-Neto
Summary: This study demonstrates that commonality analysis and hierarchical partitioning, which are widely used for estimating predictor importance and improving regression model interpretation, are related and complementary frameworks that can be expanded for the analysis of multiple-response models. The authors mathematically establish the links between these frameworks and generalize them to allow the analysis of any number of predictor variables or groups of predictor variables.
METHODS IN ECOLOGY AND EVOLUTION
(2022)
Article
Biodiversity Conservation
Jinlong Zhang, Gunter A. Fischer
Summary: This study modeled the potential distribution of the critically endangered Chinese Swamp Cypress, showing that different types of occurrence records influenced suitability predictions, highlighting the importance of considering multiple record types to better understand species' ecological characteristics and suitability.
GLOBAL ECOLOGY AND CONSERVATION
(2021)
Article
Ecology
Huiling Zhu, Jinlong Zhang, Mang Lung Cheuk, Billy C. H. Hau, Gunter. A. A. Fischer, Stephan. W. W. Gale
Summary: Anthropogenic disturbance has resulted in the clearance and degradation of tropical forests. Monocultural plantations, such as forest plantations, have a significant negative impact on forest recovery and hinder the restoration of forest structure, diversity, and functioning.
FRONTIERS IN FORESTS AND GLOBAL CHANGE
(2023)
Article
Biodiversity Conservation
Gang Feng, Lingfeng Mao, Blas M. Benito, Nathan G. Swenson, Jens-Christian Svenning
BIOLOGICAL CONSERVATION
(2017)