Ancient mitochondrial genome reveals trace of prehistoric migration in the east Pamir by pastoralists

mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters

(2013) Hákon Jónsson et al.   BIOINFORMATICS

An update to MitoTool: Using a new scoring system for faster mtDNA haplogroup determination

(2013) Long Fan et al.   MITOCHONDRION

Ancient DNA Analysis of Mid-Holocene Individuals from the Northwest Coast of North America Reveals Different Evolutionary Paths for Mitogenomes

(2013) Yinqiu Cui et al.   PLoS One

A “Copernican” Reassessment of the Human Mitochondrial DNA Tree from its Root

(2012) Doron M. Behar et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

Temporal Patterns of Nucleotide Misincorporations and DNA Fragmentation in Ancient DNA

(2012) Susanna Sawyer et al.   PLoS One

Genetic characteristics and migration history of a bronze culture population in the West Liao-River valley revealed by ancient DNA

(2011) Hongjie Li et al.   JOURNAL OF HUMAN GENETICS

SNVer: a statistical tool for variant calling in analysis of pooled or individual next-generation sequencing data

(2011) Zhi Wei et al.   NUCLEIC ACIDS RESEARCH

Inferring the Population Expansions in Peopling of Japan

(2011) Min-Sheng Peng et al.   PLoS One

Early Eurasian migration traces in the Tarim Basin revealed by mtDNA polymorphisms

(2010) Yinqiu Cui et al.   AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY

The mtDNA composition of Uzbekistan: a microcosm of Central Asian patterns

(2010) Jodi A. Irwin et al.   INTERNATIONAL JOURNAL OF LEGAL MEDICINE

MitoTool: A web server for the analysis and retrieval of human mitochondrial DNA sequence variations

(2010) Long Fan et al.   MITOCHONDRION

The Peopling of Europe from the Mitochondrial Haplogroup U5 Perspective

(2010) Boris Malyarchuk et al.   PLoS One

Genetic Diversity among Ancient Nordic Populations

(2010) Linea Melchior et al.   PLoS One

Correcting for Purifying Selection: An Improved Human Mitochondrial Molecular Clock

(2009) Pedro Soares et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Ancient DNA provides new insights into the history of south Siberian Kurgan people

(2009) Christine Keyser et al.   HUMAN GENETICS

Genetic Discontinuity Between Local Hunter-Gatherers and Central Europe's First Farmers

(2009) B. Bramanti et al.   SCIENCE

Bayesian coalescent inference of major human mitochondrial DNA haplogroup expansions in Africa

(2008) Q. D Atkinson et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

mtDNA Variation Predicts Population Size in Humans and Reveals a Major Southern Asian Chapter in Human Prehistory

(2007) Q. D. Atkinson et al.   MOLECULAR BIOLOGY AND EVOLUTION