XWAS: A Software Toolset for Genetic Data Analysis and Association Studies of the X Chromosome

X-inactivation informs variance-based testing for X-linked association of a quantitative trait

(2015) Li Ma et al.   BMC GENOMICS

Contrasting X-Linked and Autosomal Diversity across 14 Human Populations

(2014) Leonardo Arbiza et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Accounting for eXentricities: Analysis of the X Chromosome in GWAS Reveals X-Linked Genes Implicated in Autoimmune Diseases

(2014) Diana Chang et al.   PLoS One

Sex differences in disease genetics: evidence, evolution, and detection

(2014) William P. Gilks et al.   TRENDS IN GENETICS

Chromosome X-Wide Association Study Identifies Loci for Fasting Insulin and Height and Evidence for Incomplete Dosage Compensation

(2014) Taru Tukiainen et al.   PLoS Genetics

eXclusion: Toward Integrating the X Chromosome in Genome-wide Association Analyses

(2013) Anastasia L. Wise et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Immunohistochemical expression of heat shock protein 70 in vitiligo

(2013) Asmaa Gaber Abdou et al.   Annals of Diagnostic Pathology

A central role for inducible heat-shock protein 70 in autoimmune vitiligo

(2013) Jeffrey A. Mosenson et al.   EXPERIMENTAL DERMATOLOGY

Association between Helicobacter Pylori Infection and Ulcerative Colitis-A Case Control Study from China

(2013) Xi Jin et al.   International Journal of Medical Sciences

The NHGRI GWAS Catalog, a curated resource of SNP-trait associations

(2013) Danielle Welter et al.   NUCLEIC ACIDS RESEARCH

NCBI’s Database of Genotypes and Phenotypes: dbGaP

(2013) Kimberly A. Tryka et al.   NUCLEIC ACIDS RESEARCH

Gene-Based Testing of Interactions in Association Studies of Quantitative Traits

(2013) Li Ma et al.   PLoS Genetics

Dosage Compensation of the Sex Chromosomes

(2012) Christine M. Disteche   Annual Review of Genetics

Analysis of case–control association studies with known risk variants

(2012) Noah Zaitlen et al.   BIOINFORMATICS

XM: Association Testing on the X-Chromosome in Case-Control Samples With Related Individuals

(2012) Timothy Thornton et al.   GENETIC EPIDEMIOLOGY

Genome-wide association analyses identify 13 new susceptibility loci for generalized vitiligo

(2012) Ying Jin et al.   NATURE GENETICS

Fast and accurate genotype imputation in genome-wide association studies through pre-phasing

(2012) Bryan Howie et al.   NATURE GENETICS

Age of onset of amyotrophic lateral sclerosis is modulated by a locus on 1p34.1

(2012)   NEUROBIOLOGY OF AGING

Association Analysis of the Extended MHC Region in Celiac Disease Implicates Multiple Independent Susceptibility Loci

(2012) Richard Ahn et al.   PLoS One

Chromosome-wide DNA methylation analysis predicts human tissue-specific X inactivation

(2011) Allison M. Cotton et al.   HUMAN GENETICS

Association Tests for X-Chromosomal Markers – A Comparison of Different Test Statistics

(2011) Christina Loley et al.   HUMAN HEREDITY

A powerful truncated tail strength method for testing multiple null hypotheses in one dataset

(2011) Bo Jiang et al.   JOURNAL OF THEORETICAL BIOLOGY

Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis

(2011) Stephen Sawcer et al.   NATURE

Interaction between ERAP1 and HLA-B27 in ankylosing spondylitis implicates peptide handling in the mechanism for HLA-B27 in disease susceptibility

(2011) David M Evans et al.   NATURE GENETICS

HSP70i is a critical component of the immune response leading to vitiligo

(2011) Jeffrey A. Mosenson et al.   Pigment Cell & Melanoma Research

Sex differences in autoimmune diseases

(2011) Rhonda Voskuhl   Biology of Sex Differences

Highly Punctuated Patterns of Population Structure on the X Chromosome and Implications for African Evolutionary History

(2010) Charla A. Lambert et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Sex-Averaged Recombination and Mutation Rates on the X Chromosome: A Comment on Labuda et al.

(2010) Kirk E. Lohmueller et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Estimators of the Human Effective Sex Ratio Detect Sex Biases on Different Timescales

(2010) Leslie S. Emery et al.   AMERICAN JOURNAL OF HUMAN GENETICS

A Versatile Gene-Based Test for Genome-wide Association Studies

(2010) Jimmy Z. Liu et al.   AMERICAN JOURNAL OF HUMAN GENETICS

METAL: fast and efficient meta-analysis of genomewide association scans

(2010) C. J. Willer et al.   BIOINFORMATICS

Genetic variants at 2q24 are associated with susceptibility to type 2 diabetes

(2010) Lu Qi et al.   HUMAN MOLECULAR GENETICS

Comprehensive Association Analysis of Candidate Genes for Generalized Vitiligo Supports XBP1, FOXP3, and TSLP

(2010) Stanca A. Birlea et al.   JOURNAL OF INVESTIGATIVE DERMATOLOGY

Chromosome 9p21 in amyotrophic lateral sclerosis in Finland: a genome-wide association study

(2010) Hannu Laaksovirta et al.   LANCET NEUROLOGY

Can a Sex-Biased Human Demography Account for the Reduced Effective Population Size of Chromosome X in Non-Africans?

(2010) A. Keinan et al.   MOLECULAR BIOLOGY AND EVOLUTION

The ratio of human X chromosome to autosome diversity is positively correlated with genetic distance from genes

(2010) Michael F Hammer et al.   NATURE GENETICS

Variant ofTYRand Autoimmunity Susceptibility Loci in Generalized Vitiligo

(2010) Ying Jin et al.   NEW ENGLAND JOURNAL OF MEDICINE

Genomic Analyses of Sex Chromosome Evolution

(2009) Melissa A. Wilson et al.   Annual Review of Genomics and Human Genetics

Association between Helicobacter pylori infection and inflammatory bowel disease

(2009) Jay Luther et al.   INFLAMMATORY BOWEL DISEASES

Genome-wide association study of ulcerative colitis identifies three new susceptibility loci, including the HNF4A region

(2009) Jeffrey C Barrett et al.   NATURE GENETICS

Genome-wide scan reveals association of psoriasis with IL-23 and NF-κB pathways

(2009) Rajan P Nair et al.   NATURE GENETICS

Sex chromosomes and genetic association studies

(2009) David G Clayton   Genome Medicine

Testing for association on the X chromosome

(2008) David Clayton   BIOSTATISTICS

Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis

(2008) Sergio E. Baranzini et al.   HUMAN MOLECULAR GENETICS

Integrated genotype calling and association analysis of SNPs, common copy number polymorphisms and rare CNVs

(2008) Joshua M Korn et al.   NATURE GENETICS

Sex-specific genetic architecture of human disease

(2008) Carole Ober et al.   NATURE REVIEWS GENETICS

Sex-Biased Evolutionary Forces Shape Genomic Patterns of Human Diversity

(2008) Michael F. Hammer et al.   PLoS Genetics