Metal-Ion-Dependent Folding of a Uranyl-Specific DNAzyme: Insight into Function from Fluorescence Resonance Energy Transfer Studies

A Stability Concept for Metal Ion Coordination to Single-Stranded Nucleic Acids and Affinities of Individual Sites

(2010) Roland K. O. Sigel et al.   ACCOUNTS OF CHEMICAL RESEARCH

Label-Free Fluorescent Functional DNA Sensors Using Unmodified DNA: A Vacant Site Approach

(2010) Yu Xiang et al.   ANALYTICAL CHEMISTRY

Influence of Cleavage Site on Global Folding of an RNA-Cleaving DNAzyme

(2010) Jeffrey C. F. Lam et al.   CHEMBIOCHEM

Controlling ribozyme activity by metal ions

(2010) Joachim Schnabl et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Molecular Evolution of Functional Nucleic Acids with Chemical Modifications

(2010) Masayasu Kuwahara et al.   MOLECULES

Tackling metal regulation and transport at the single-molecule level

(2010) Peng Chen et al.   NATURAL PRODUCT REPORTS

Ca2+ Induces the Formation of Two Distinct Subpopulations of Group II Intron Molecules

(2009) Miriam Steiner et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Comparative Enzymology and Structural Biology of RNA Self-Cleavage

(2009) Martha J. Fedor   Annual Review of Biophysics

Biochemical Characterization of a Uranyl Ion-Specific DNAzyme

(2009) Andrea K. Brown et al.   CHEMBIOCHEM

Functional Nucleic Acid Sensors

(2009) Juewen Liu et al.   CHEMICAL REVIEWS

Biologically Inspired Synthetic Enzymes Made from DNA

(2009) Kenny Schlosser et al.   CHEMISTRY & BIOLOGY

Exploring Metal Ion Coordination to Nucleic Acids by NMR

(2009) Silke Johannsen et al.   CHIMIA

The Influence of Monovalent Cation Size on the Stability of RNA Tertiary Structures

(2009) Dominic Lambert et al.   JOURNAL OF MOLECULAR BIOLOGY

Threshold Occupancy and Specific Cation Binding Modes in the Hammerhead Ribozyme Active Site are Required for Active Conformation

(2009) Tai-Sung Lee et al.   JOURNAL OF MOLECULAR BIOLOGY

Local Rather than Global Folding Enables the Lead-dependent Activity of the 8-17 Deoxyribozyme: Evidence from Contact Photo-crosslinking

(2009) Yong Liu et al.   JOURNAL OF MOLECULAR BIOLOGY

Metal-Induced Folding of Diels−Alderase Ribozymes Studied by Static and Time-Resolved NMR Spectroscopy

(2009) Vijayalaxmi Manoharan et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Stabilization of Three-Way Junctions of DNA under Molecular Crowding Conditions

(2009) Sanjukta Muhuri et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Activity, Folding and Z-DNA Formation of the 8-17 DNAzyme in the Presence of Monovalent Ions

(2009) Debapriya Mazumdar et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Sensing of UO22+and Design of Logic Gates by the Application of Supramolecular Constructs of Ion-Dependent DNAzymes

(2009) Michal Moshe et al.   NANO LETTERS

A Highly Selective DNAzyme Sensor for Mercuric Ions

(2008) Marcel Hollenstein et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

The Structure of Cyanine 5 Terminally Attached to Double-Stranded DNA: Implications for FRET Studies†

(2008) Asif Iqbal et al.   BIOCHEMISTRY

Molecular crowding effects on structure and stability of DNA

(2008) Daisuke Miyoshi et al.   BIOCHIMIE

RNA Folding: Thermodynamic and Molecular Descriptions of the Roles of Ions

(2008) David E. Draper   BIOPHYSICAL JOURNAL

Catalytic DNA (deoxyribozymes) for synthetic applications—current abilities and future prospects

(2008) Scott K. Silverman   CHEMICAL COMMUNICATIONS

New trends for metal complexes with anticancer activity

(2008) Pieter CA Bruijnincx et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

A Contact Photo-Cross-linking Investigation of the Active Site of the 8-17 Deoxyribozyme

(2008) Yong Liu et al.   JOURNAL OF MOLECULAR BIOLOGY

Single VS Ribozyme Molecules Reveal Dynamic and Hierarchical Folding Toward Catalysis

(2008) Miguel J.B. Pereira et al.   JOURNAL OF MOLECULAR BIOLOGY

Highly Sensitive and Selective Colorimetric Sensors for Uranyl (UO22+): Development and Comparison of Labeled and Label-Free DNAzyme-Gold Nanoparticle Systems

(2008) Jung Heon Lee et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

The Different Role of High-Affinity and Low-Affinity Metal Ions in Cleavage by a Tertiary Stabilized Cis Hammerhead Ribozyme from Tobacco Ringspot Virus

(2008) Natalia Kisseleva et al.   OLIGONUCLEOTIDES

Metal-Ligand Exchange Kinetics in Platinum and Ruthenium Complexes

(2008) By Jan Reedijk  

Single-molecule nonequilibrium periodic Mg2+-concentration jump experiments reveal details of the early folding pathways of a large RNA

(2008) X. Qu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Single-molecule studies of group II intron ribozymes

(2008) M. Steiner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Orientation dependence in fluorescent energy transfer between Cy3 and Cy5 terminally attached to double-stranded nucleic acids

(2008) A. Iqbal et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metal ion specificities for folding and cleavage activity in the Schistosoma hammerhead ribozyme

(2008) J. L. Boots et al.   RNA

Leakage and slow allostery limit performance of single drug-sensing aptazyme molecules based on the hammerhead ribozyme

(2008) C. de Silva et al.   RNA