4.6 Article

The Interaction of Zinc(II) and Hydroxamic Acids and a Metal-Triggered Lossen Rearrangement

Journal

CHEMISTRY-A EUROPEAN JOURNAL
Volume 15, Issue 48, Pages 13399-13405

Publisher

WILEY-V C H VERLAG GMBH
DOI: 10.1002/chem.200901645

Keywords

density functional calculations; hydroxamic acid; Lossen rearrangement; mass spectrometry; zinc

Funding

  1. Academy of Sciences of the Czech Republic [KJB400550704]
  2. Ministry of Education of the Czech Republic [MSM0021620857, RP MSMT 14/63]
  3. Charles University Grant Agency [259029]

Ask authors/readers for more resources

The structure and reactivity of a complex of zinc(II), water, acetic acid, and acetohydroxamic acid, in which one of the acids is deprotonated, is investigated by means of mass spectrometry, labeling studies, and density functional calculations to unravel the exceptional binding properties of hydroxamic acids towards zinc-containing enzymes at the molecular level. It is shown that acetohydroxamic acid is deprotonated in the complex, whereas acetic acid is present in its neutral form. The binding energies of the ligands towards zinc increase in the following order: water < acetic acid < acetohydroxamic acid. The structure of the complex and its fragmentation provide experimental evidence for the proposed mode of operation of drugs based on hydroxamic acids. Furthermore, coordinatively unsaturated complexes of zinc and acetohydroxamic acid undergo a zinc-assisted Lossen rearrangement followed by elimination of water if acetohydroxamic acid is present as a neutral ligand, or by loss of methylisocyanate if acetohydroxamic acid is deprotonated.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.6
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Review Spectroscopy

Ion spectroscopy in methane activation

Jana Roithova, Joost M. Bakker

Summary: This review focuses on ion spectroscopy studies of complexes relevant for methane activation with metal ions and clusters, exploring the interaction between intact methane molecules and metal ions, as well as the spectroscopic characterization of activation products of metal-methane reactions. Recent research has shifted towards investigating interactions between methane and metal clusters.

MASS SPECTROMETRY REVIEWS (2022)

Article Chemistry, Multidisciplinary

Binding Interactions in Copper, Silver and Gold π-Complexes

Jaya Mehara, Brandon T. Watson, Anurag Noonikara-Poyil, Adway O. Zacharias, Jana Roithova, H. V. Rasika Dias

Summary: This paper investigates the interactions between copper(I), silver(I), and gold(I) metals and pi-ligands, showing that these interactions are influenced by the electron-donating and electron-withdrawing substituents of the ancillary ligands.

CHEMISTRY-A EUROPEAN JOURNAL (2022)

Article Chemistry, Multidisciplinary

Monitoring Reaction Intermediates to Predict Enantioselectivity Using Mass Spectrometry

Roelant Hilgers, Sin Yong Teng, Anamarija Bris, Aleksandr Y. Pereverzev, Paul White, Jeroen J. Jansen, Jana Roithova

Summary: This study introduces a simple and rapid method for determining enantioselectivities based on mass spectrometry. By using ion mobility separation and delayed reactant labeling experiments, the method can link mass spectra with reaction kinetics to predict the enantioselectivity of the overall reaction.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2022)

Article Chemistry, Multidisciplinary

Sulfonyl Nitrene and Amidyl Radical: Structure and Reactivity

Jan Zelenka, Aleksandr Pereverzev, Ullrich Jahn, Jana Roithova

Summary: This study investigates the reactivity of reactive radicals generated from sulfonyl azides through photocatalytic activation, and their involvement in C-H activation reactions. The reactivities of these radicals are found to be influenced by different mechanisms, which provide theoretical basis for controlling the reactivity of these intermediates.

CHEMISTRY-A EUROPEAN JOURNAL (2022)

Article Chemistry, Organic

Mechanistic Studies on the Epoxidation of Alkenes by Macrocyclic Manganese Porphyrin Catalysts

Xiaofei Chen, Quentin Duez, Guilherme L. Tripodi, Pieter J. Gilissen, Dimitrios Piperoudis, Paul Tinnemans, Johannes A. A. W. Elemans, Jana Roithova, Roeland J. M. Nolte

Summary: In this study, the mechanistic process of alkene epoxidation mediated by achiral and chiral manganese(V)oxo porphyrin cage complexes was investigated using ion mobility mass spectrometry. The results show that the oxo ligand on the outside of the cage reacts faster with the substrate than the oxo ligand on the inside, indicating how the catalytic activity of the macrocyclic porphyrin complex can be tuned.

EUROPEAN JOURNAL OF ORGANIC CHEMISTRY (2022)

Article Biochemical Research Methods

Experimental techniques and terminology in gas-phase ion spectroscopy

Aleksandr Pereverzev, Jana Roithova

Summary: This perspective provides an overview of action spectroscopy methods for measuring electronic, vibrational, and rotational spectra of mass-selected ions in the gas phase. The existing experimental approaches are classified and summarized. The authors address the issue of multiple names for the same techniques and suggest using commonly used terms to simplify and unify the notation in ion spectroscopy. They believe that this can make the field more accessible to experts outside the mass spectrometry community and have a significant impact on the applications of gas-phase action ion spectroscopy.

JOURNAL OF MASS SPECTROMETRY (2022)

Editorial Material Biochemical Research Methods

Experimental techniques and terminology in gas-phase ion spectroscopy

Aleksandr Y. Pereverzev, Jana Roithova

JOURNAL OF MASS SPECTROMETRY (2022)

Article Chemistry, Inorganic & Nuclear

Hydrogen Bonding Effect on the Oxygen Binding and Activation in Cobalt(III)-Peroxo Complexes

Rob Bakker, Abhinav Bairagi, Monica Rodriguez, Guilherme L. Tripodi, Aleksandr Y. Pereverzev, Jana Roithova

Summary: Cobalt(III)peroxo complexes were studied to investigate the effect of hydrogen bonding on the O2 binding energy and the O-O bond activation. The results showed that hydrogen bonding stabilized the cobalt(III)peroxo core by 10-20 kJ mol-1. The introduction of the first amino group had the largest stabilization effect, while additional amino groups did not significantly change the results. The amino group could transfer a hydrogen atom to the peroxo ligands, leading to O-O bond cleavage with thermodynamic favorability but entropic disfavorability.

INORGANIC CHEMISTRY (2023)

Article Chemistry, Physical

Octahedral Iron-Acyl-Nitrenoid Intermediates in Sulphur -Nitrogen Coupling and Hydrogen Atom Transfer Reactions

Monica Rodriguez, Aleksandr Y. Pereverzev, Jana Roithova

Summary: A novel octahedral non-heme iron-acyl-nitrenoid complex was presented, and its reactivity was studied using a flow chemistry setup with online mass spectrometry detection. It was found that the iron-acyl-nitrenoid complex can activate C-H bonds via hydrogen-atom transfer and form new N-S bonds in the reaction with thiophenol. However, the reaction with hydrocarbons results in the activation of C-H bonds without a subsequent rebound process.

CHEMCATCHEM (2023)

Article Chemistry, Multidisciplinary

Can Copper(I) and Silver(I) be Hydrogen Bond Acceptors?

Erik Andris, Michal Straka, Jan Vrana, Ales Ruliska, Jana Roithova, Lubomir Rulisek

Summary: Gold(I) centers can form moderately strong (Au...H) hydrogen bonds with tertiary ammonium groups, but similar hydrogen bonding interactions with isoelectronic silver(I) or copper(I) centers are unknown. The replacement of Cl with Br or I in 3AuCl(+) had only a small effect on the Au...H bond strength. Experimental and computational results showed that the Ag...H and Cu...H interactions were only marginal in the complexes studied, while a Cl...H hydrogen bond was formed. However, when less flexible ligands were used, the presence of Ag...H and Cu...H hydrogen bonds with similar strength to the Au...H bond in 3AuCl(+) was predicted.

CHEMISTRY-A EUROPEAN JOURNAL (2023)

Article Chemistry, Multidisciplinary

Copper(II)-TEMPO Interaction

Jaya Mehara, Jana Roithova

Summary: Copper(II) complexes with N-oxyl reagents like TEMPO can selectively oxidize alcohols to aldehydes or ketones. Intermediate copper complexes were theoretically studied but never experimentally detected. This study presents an analysis of frozen intermediates containing alcohols lacking α-hydrogen atoms, preventing oxidation.

ISRAEL JOURNAL OF CHEMISTRY (2023)

Article Chemistry, Physical

Isomerisation of phenanthrene dication studied by tagging photodissociation ion spectroscopy and DFT calculations

Aleksandr Y. Pereverzev, Corentin Rossi, Jana Roithova

Summary: The search for chemical structures responsible for diffuse interstellar bands remains a major challenge in astrochemistry, requiring experimental verification of structures obtained under laboratory conditions. In this study, we demonstrate the isomerization of the doubly charged polyaromatic hydrocarbon phenanthrene obtained through electron ionization. Our results show that the phenanthrene dication has a broad visible spectrum, making it unsuitable for diffuse interstellar band search. We also observe the isomerization of phenanthrene dication during the ionization process, leading to the detection of another C14H102+ isomer.

MOLECULAR PHYSICS (2023)

Article Chemistry, Physical

Vibrationally resolved electronic spectroscopy of rhodamine B cation at less than 5 K: combining gas phase absorption and matrix isolation fluorescence spectroscopy

Sreekanta Debnath, Alexander Schaefer, Karolina A. Haupa, Dmitry Strelnikov, Jana Roithova, Juraj Jasik, Sergei Lebedkin, Manfred M. Kappes

Summary: Helium tagging photodissociation action spectroscopy and laser-induced fluorescence spectroscopy in neon matrix were used to study the photophysics of electrosprayed rhodamine B cation at low temperatures. The experiments were conducted using He-TAG apparatus for helium tagging and Depo-II machine for LIF measurements. The resulting electronic spectra provide benchmarks for theoretical description of this organic dye.

MOLECULAR PHYSICS (2023)

Article Chemistry, Multidisciplinary

Mechanistic studies of the palladium-catalyzed S,O-ligand promoted C-H olefination of aromatic compounds

Kananat Naksomboon, Enrique Gomez-Bengoa, Jaya Mehara, Jana Roithova, Edwin Otten, M. Angeles Fernandez-Ibanez

Summary: Pd-catalyzed C-H functionalization reactions of non-directed substrates have emerged as a promising alternative to the use of directing groups. A new type of S,O-ligand has been found to be highly efficient in promoting Pd-catalyzed C-H olefination reactions of non-directed arenes, although its role in the process was unclear. Through various mechanistic tools, it was discovered that C-H activation is the rate-determining step and the S,O-ligand triggers the formation of more reactive Pd cationic species, explaining the observed acceleration of the reaction. These findings provide important insights into the role of the S,O-ligand in promoting Pd-catalyzed C-H functionalization reactions.

CHEMICAL SCIENCE (2023)

Article Chemistry, Multidisciplinary

Kinetic enantio-recognition of chiral viologen guests by planar-chiral porphyrin cages

Pieter J. Gilissen, Quentin Duez, Guilherme L. Tripodi, Magda M. J. Dekker, Jiangkun Ouyang, Kais Dhbaibi, Nicolas Vanthuyne, Jeanne Crassous, Jana Roithova, Johannes A. A. W. Elemans, Roeland J. M. Nolte

Summary: The kinetic enantio-recognition of chiral viologen guests by planar-chiral porphyrin cage compounds is determined by the planar chirality of the host and influenced by its size, but not the chirality of its substituents.

CHEMICAL COMMUNICATIONS (2023)

No Data Available