Methylation of microRNA genes regulates gene expression in bisexual flower development in andromonoecious poplar

Evolutionary conservation of microRNA regulatory programs in plant flower development

(2013) Yan Luo et al.   DEVELOPMENTAL BIOLOGY

Sexual dimorphic floral development in dioecious plants revealed by transcriptome, phytohormone, and DNA methylation analysis in Populus tomentosa

(2013) Yuepeng Song et al.   PLANT MOLECULAR BIOLOGY

Sexual Dimorphism Floral MicroRNA Profiling and Target Gene Expression in Andromonoecious Poplar (Populus tomentosa)

(2013) Yuepeng Song et al.   PLoS One

Dynamic DNA cytosine methylation in the Populus trichocarpa genome: tissue-level variation and relationship to gene expression

(2012) Kelly J Vining et al.   BMC GENOMICS

Single-base resolution maps of cultivated and wild rice methylomes and regulatory roles of DNA methylation in plant gene expression

(2012) Xin Li et al.   BMC GENOMICS

Translational control by 3'-UTR-binding proteins

(2012) E. Szostak et al.   Briefings in Functional Genomics

Methylome of DNase I sensitive chromatin inPopulus trichocarpashoot apical meristematic cells: a simplified approach revealing characteristics of gene-body DNA methylation in open chromatin state

(2012) Clément Lafon-Placette et al.   NEW PHYTOLOGIST

Sex-specific DNA methylation and gene expression in andromonoecious poplar

(2012) Yuepeng Song et al.   PLANT CELL REPORTS

High Resolution Methylome Map of Rat Indicates Role of Intragenic DNA Methylation in Identification of Coding Region

(2012) Satish Sati et al.   PLoS One

Evolution of MIR159/319 microRNA genes and their post-transcriptional regulatory link to siRNA pathways

(2011) Yang Li et al.   BMC EVOLUTIONARY BIOLOGY

Let-7 and miR-200 microRNAs: Guardians against pluripotency and cancer progression

(2011) Marcus E. Peter   CELL CYCLE

Analysis of MiR-195 and MiR-497 Expression, Regulation and Role in Breast Cancer

(2011) D. Li et al.   CLINICAL CANCER RESEARCH

Genome-wide responses to drought in forest trees

(2011) E. T. Hamanishi et al.   FORESTRY

MicroRNA-335 inhibits tumor reinitiation and is silenced through genetic and epigenetic mechanisms in human breast cancer

(2011) K. J. Png et al.   GENES & DEVELOPMENT

Time course and amplitude of DNA methylation in the shoot apical meristem are critical points for bolting induction in sugar beet and bolting tolerance between genotypes

(2011) Marie-Véronique Trap-Gentil et al.   JOURNAL OF EXPERIMENTAL BOTANY

An epigenetic view of plant cells cultured in vitro: somaclonal variation and beyond

(2011) C. Miguel et al.   JOURNAL OF EXPERIMENTAL BOTANY

Clone history shapes Populus drought responses

(2011) S. Raj et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DNA methylation and histone acetylation: genotypic variations in hybrid poplars, impact of water deficit and relationships with productivity

(2010) Delphine Gourcilleau et al.   ANNALS OF FOREST SCIENCE

DNA Methylation Mediated by a MicroRNA Pathway

(2010) Liang Wu et al.   MOLECULAR CELL

The actin multigene family in Populus: organization, expression and phylogenetic analysis

(2010) Deqiang Zhang et al.   MOLECULAR GENETICS AND GENOMICS

Principles and challenges of genome-wide DNA methylation analysis

(2010) Peter W. Laird   NATURE REVIEWS GENETICS

Small RNAs - secrets and surprises of the genome

(2010) Xuemei Chen   PLANT JOURNAL

Role for DNA Methylation in the Regulation of miR-200c and miR-141 Expression in Normal and Cancer Cells

(2010) Lukas Vrba et al.   PLoS One

Genome-Wide Evolutionary Analysis of Eukaryotic DNA Methylation

(2010) A. Zemach et al.   SCIENCE

The Sequential Action of miR156 and miR172 Regulates Developmental Timing in Arabidopsis

(2009) Gang Wu et al.   CELL

Genome-Wide and Organ-Specific Landscapes of Epigenetic Modifications and Their Relationships to mRNA and Small RNA Transcriptomes in Maize

(2009) X. Wang et al.   PLANT CELL

Biochemical Evidence for Translational Repression by Arabidopsis MicroRNAs

(2009) E. Lanet et al.   PLANT CELL

AGAMOUS Controls GIANT KILLER, a Multifunctional Chromatin Modifier in Reproductive Organ Patterning and Differentiation

(2009) Kian-Hong Ng et al.   PLOS BIOLOGY

SOAP: short oligonucleotide alignment program

(2008) R. Li et al.   BIOINFORMATICS

A Double-Negative Feedback Loop between ZEB1-SIP1 and the microRNA-200 Family Regulates Epithelial-Mesenchymal Transition

(2008) C. P. Bracken et al.   CANCER RESEARCH

Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis

(2008) Ryan Lister et al.   CELL

Most mammalian mRNAs are conserved targets of microRNAs

(2008) R. C. Friedman et al.   GENOME RESEARCH

DNA methylation landscapes: provocative insights from epigenomics

(2008) Miho M. Suzuki et al.   NATURE REVIEWS GENETICS