Identification of regulatory network hubs that control lipid metabolism inChlamydomonas reinhardtii

The response of Chlamydomonas reinhardtii to nitrogen deprivation: a systems biology analysis

(2015) Jeong-Jin Park et al.   PLANT JOURNAL

A systems-wide comparison of red rice (Oryza longistaminata) tissues identifies rhizome specific genes and proteins that are targets for cultivated rice improvement

(2014) Ruifeng He et al.   BMC PLANT BIOLOGY

Nitrogen-Sparing Mechanisms in Chlamydomonas Affect the Transcriptome, the Proteome, and Photosynthetic Metabolism

(2014) S. Schmollinger et al.   PLANT CELL

The Regulation of Photosynthetic Structure and Function during Nitrogen Deprivation inChlamydomonas reinhardtii

(2014) Matthew T. Juergens et al.   PLANT PHYSIOLOGY

Lipid Profile Remodeling in Response to Nitrogen Deprivation in the Microalgae Chlorella sp. (Trebouxiophyceae) and Nannochloropsis sp. (Eustigmatophyceae)

(2014) Gregory J. O. Martin et al.   PLoS One

Transcriptome analysis of Chlamydomonas reinhardtii during the process of lipid accumulation

(2013) Hexin Lv et al.   GENOMICS

Systems-Level Analysis of Nitrogen Starvation-Induced Modifications of Carbon Metabolism in a Chlamydomonas reinhardtii Starchless Mutant

(2013) I. K. Blaby et al.   PLANT CELL

SDG2-Mediated H3K4 Methylation Is Required for Proper Arabidopsis Root Growth and Development

(2013) Xiaozhen Yao et al.   PLoS One

Metabolic engineering of lipid catabolism increases microalgal lipid accumulation without compromising growth

(2013) E. M. Trentacoste et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Three Acyltransferases and Nitrogen-responsive Regulator Are Implicated in Nitrogen Starvation-induced Triacylglycerol Accumulation inChlamydomonas

(2012) Nanette R. Boyle et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Post-translational control of tetrapyrrole biosynthesis in plants, algae, and cyanobacteria

(2012) O. Czarnecki et al.   JOURNAL OF EXPERIMENTAL BOTANY

Exploiting diversity and synthetic biology for the production of algal biofuels

(2012) D. Ryan Georgianna et al.   NATURE

Oil accumulation is controlled by carbon precursor supply for fatty acid synthesis in Chlamydomonas reinhardtii

(2012) Jilian Fan et al.   PLANT AND CELL PHYSIOLOGY

A Galactoglycerolipid Lipase Is Required for Triacylglycerol Accumulation and Survival Following Nitrogen Deprivation in Chlamydomonas reinhardtii

(2012) X. Li et al.   PLANT CELL

Detection and interpretation of metabolite–transcript coresponses using combined profiling data

(2011) Henning Redestig et al.   BIOINFORMATICS

Comprehensive Comparison of iTRAQ and Label-free LC-Based Quantitative Proteomics Approaches Using Two Chlamydomonas reinhardtii Strains of Interest for Biofuels Engineering

(2011) Hongxia Wang et al.   JOURNAL OF PROTEOME RESEARCH

ABA-Dependent and -Independent G-Protein Signaling inArabidopsisRoots Revealed through an iTRAQ Proteomics Approach

(2011) Sophie Alvarez et al.   JOURNAL OF PROTEOME RESEARCH

Phytozome: a comparative platform for green plant genomics

(2011) David M. Goodstein et al.   NUCLEIC ACIDS RESEARCH

Overlapping Photoprotective Function of Vitamin E and Carotenoids in Chlamydomonas

(2011) Z. Li et al.   PLANT PHYSIOLOGY

Comparative transcriptome and metabolite analysis of oil palm and date palm mesocarp that differ dramatically in carbon partitioning

(2011) F. Bourgis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Correlation Network Analysis reveals a sequential reorganization of metabolic and transcriptional states during germination and gene-metabolite relationships in developing seedlings of Arabidopsis

(2010) Elizabeth Allen et al.   BMC Systems Biology

Photorespiration: current status and approaches for metabolic engineering

(2010) Veronica G Maurino et al.   CURRENT OPINION IN PLANT BIOLOGY

Metabolic Pathway Relationships Revealed by an Integrative Analysis of the Transcriptional and Metabolic Temperature Stress-Response Dynamics in Yeast

(2010) Dirk Walther et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Changes in Transcript Abundance in Chlamydomonas reinhardtii following Nitrogen Deprivation Predict Diversion of Metabolism

(2010) R. Miller et al.   PLANT PHYSIOLOGY

Disruption of theArabidopsisCGI-58 homologue produces Chanarin–Dorfman-like lipid droplet accumulation in plants

(2010) Christopher N. James et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

AP2/EREBP transcription factors are part of gene regulatory networks and integrate metabolic, hormonal and environmental signals in stress acclimation and retrograde signalling

(2010) Karl-Josef Dietz et al.   PROTOPLASMA

RNA Interference Silencing of a Major Lipid Droplet Protein Affects Lipid Droplet Size inChlamydomonas reinhardtii

(2009) Eric R. Moellering et al.   EUKARYOTIC CELL

An ancient light-harvesting protein is critical for the regulation of algal photosynthesis

(2009) Graham Peers et al.   NATURE

Cysteine modification of a specific repressor protein controls the translational status of nucleus-encoded LHCII mRNAs in Chlamydomonas

(2009) L. Wobbe et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transcription factors and regulation of photosynthetic and related metabolism under environmental stresses

(2008) Nelson J. M. Saibo et al.   ANNALS OF BOTANY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

High quality metabolomic data for Chlamydomonas reinhardtii

(2008) Do Lee et al.   Plant Methods

The Role of bZIP Transcription Factors in Green Plant Evolution: Adaptive Features Emerging from Four Founder Genes

(2008) Luiz Gustavo Guedes Corrêa et al.   PLoS One