Staying green postharvest: how three mutations in theArabidopsischlorophyllbreductase geneNYC1delay degreening by distinct mechanisms

The I-TASSER Suite: protein structure and function prediction

(2015) Jianyi Yang et al.   NATURE METHODS

The stay-green trait

(2014) Howard Thomas et al.   JOURNAL OF EXPERIMENTAL BOTANY

Arabidopsis STAY-GREEN2 Is a Negative Regulator of Chlorophyll Degradation during Leaf Senescence

(2014) Yasuhito Sakuraba et al.   Molecular Plant

The tomato mutationnxd1reveals a gene necessary for neoxanthin biosynthesis and demonstrates that violaxanthin is a sufficient precursor for abscisic acid biosynthesis

(2014) Hadar Neuman et al.   PLANT JOURNAL

Structural insights into substrate and coenzyme preference by SDR family protein Gox2253 fromGluconobateroxydans

(2014) Bo Yin et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Intracellular Signaling from Plastid to Nucleus

(2013) Wei Chi et al.   Annual Review of Plant Biology

Mechanism and Significance of Chlorophyll Breakdown

(2013) Bastien Christ et al.   JOURNAL OF PLANT GROWTH REGULATION

Mutation identification by direct comparison of whole-genome sequencing data from mutant and wild-type individuals using k-mers

(2013) Karl J V Nordström et al.   NATURE BIOTECHNOLOGY

Stay-green plants: what do they tell us about the molecular mechanism of leaf senescence

(2013) Makoto Kusaba et al.   PHOTOSYNTHESIS RESEARCH

NYC4, the rice ortholog of ArabidopsisTHF1, is involved in the degradation of chlorophyll - protein complexes during leaf senescence

(2013) Hiroshi Yamatani et al.   PLANT JOURNAL

The Catalytic Roles of P185 and T188 and Substrate-Binding Loop Flexibility in 3α-Hydroxysteroid Dehydrogenase/Carbonyl Reductase from Comamonas testosteroni

(2013) Chi-Ching Hwang et al.   PLoS One

Surprising roles for bilins in a green alga: Fig. 1.

(2013) Jean-David Rochaix   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

7-Hydroxymethyl chlorophyll a reductase functions in metabolic channeling of chlorophyll breakdown intermediates during leaf senescence

(2012) Yasuhito Sakuraba et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

The Plant Short-Chain Dehydrogenase (SDR) superfamily: genome-wide inventory and diversification patterns

(2012) Hanane Moummou et al.   BMC PLANT BIOLOGY

Classification and nomenclature of the superfamily of short-chain dehydrogenases/reductases (SDRs)

(2012) Bengt Persson et al.   CHEMICO-BIOLOGICAL INTERACTIONS

Early Events in Plastid Protein Degradation in stay-greenArabidopsis Reveal Differential Regulation beyond the Retention of LHCII and Chlorophyll

(2012) Julia Grassl et al.   JOURNAL OF PROTEOME RESEARCH

Overproduction of Chl b Retards Senescence Through Transcriptional Reprogramming in Arabidopsis

(2012) Yasuhito Sakuraba et al.   PLANT AND CELL PHYSIOLOGY

STAY-GREEN and Chlorophyll Catabolic Enzymes Interact at Light-Harvesting Complex II for Chlorophyll Detoxification during Leaf Senescence in Arabidopsis

(2012) Y. Sakuraba et al.   PLANT CELL

Update on the biochemistry of chlorophyll breakdown

(2012) Stefan Hörtensteiner   PLANT MOLECULAR BIOLOGY

Carbon Deprivation-Driven Transcriptome Reprogramming in Detached Developmentally Arresting Arabidopsis Inflorescences

(2012) A. Trivellini et al.   PLANT PHYSIOLOGY

Chlorophyll b Reductase Plays an Essential Role in Maturation and Storability of Arabidopsis Seeds

(2012) S. Nakajima et al.   PLANT PHYSIOLOGY

Chlorophyll cycle regulates the construction and destruction of the light-harvesting complexes

(2011) Ryouichi Tanaka et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Isolation and analysis of high quality nuclear DNA with reduced organellar DNA for plant genome sequencing and resequencing

(2011) Kerry A Lutz et al.   BMC BIOTECHNOLOGY

High resolution melting analysis for the detection of EMS induced mutations in wheat SbeIIa genes

(2011) Ermelinda Botticella et al.   BMC PLANT BIOLOGY

Computational Protein Design and Large-Scale Assessment by I-TASSER Structure Assembly Simulations

(2011) Andrea Bazzoli et al.   JOURNAL OF MOLECULAR BIOLOGY

Multiple reference genomes and transcriptomes for Arabidopsis thaliana

(2011) Xiangchao Gan et al.   NATURE

Genome-Wide Analysis Reveals Gene Expression and Metabolic Network Dynamics during Embryo Development in Arabidopsis

(2011) D. Xiang et al.   PLANT PHYSIOLOGY

A gene regulatory network controlled by the NAC transcription factor ANAC092/AtNAC2/ORE1 during salt-promoted senescence

(2010) Salma Balazadeh et al.   PLANT JOURNAL

The multiple roles of light-harvesting chlorophyll a/b-protein complexes define structure and optimize function of Arabidopsis chloroplasts: A study using two chlorophyll b-less mutants

(2009) Eun-Ha Kim et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Participation of ChlorophyllbReductase in the Initial Step of the Degradation of Light-harvesting Chlorophylla/b-Protein Complexes inArabidopsis

(2009) Yukiko Horie et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Pheophytin Pheophorbide Hydrolase (Pheophytinase) Is Involved in Chlorophyll Breakdown during Leaf Senescence in Arabidopsis

(2009) S. Schelbert et al.   PLANT CELL

QuantPrime - a flexible tool for reliable high-throughput primer design for quantitative PCR

(2008) Samuel Arvidsson et al.   BMC BIOINFORMATICS

Medium- and short-chain dehydrogenase/reductase gene and protein families

(2008) K. L. Kavanagh et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Medium- and short-chain dehydrogenase/reductase gene and protein families

(2008) B. Persson et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

ATTED-II provides coexpressed gene networks for Arabidopsis

(2008) T. Obayashi et al.   NUCLEIC ACIDS RESEARCH

Two short-chain dehydrogenase/reductases, NON-YELLOW COLORING 1 and NYC1-LIKE, are required for chlorophyll band light-harvesting complex II degradation during senescence in rice

(2008) Yutaka Sato et al.   PLANT JOURNAL

Stay-green protein, defective in Mendel’s green cotyledon mutant, acts independent and upstream of pheophorbide a oxygenase in the chlorophyll catabolic pathway

(2008) Sylvain Aubry et al.   PLANT MOLECULAR BIOLOGY