Confrontation of fibroblasts with cancer cells in vitro: gene network analysis of transcriptome changes and differential capacity to inhibit tumor growth

Distinguishing between driver and passenger mutations in individual cancer genomes by network enrichment analysis

(2014) Simon Merid et al.   BMC BIOINFORMATICS

Inhibition of tumor cell proliferation and motility by fibroblasts is both contact and soluble factor dependent

(2014) Twana Alkasalias et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Prognostic Significance in Breast Cancer of a Gene Signature Capturing Stromal PDGF Signaling

(2013) Oliver Frings et al.   AMERICAN JOURNAL OF PATHOLOGY

A Mechanical Checkpoint Controls Multicellular Growth through YAP/TAZ Regulation by Actin-Processing Factors

(2013) Mariaceleste Aragona et al.   CELL

Tumor–stroma ratio is an independent predictor for survival in early cervical carcinoma

(2013) Jing Liu et al.   GYNECOLOGIC ONCOLOGY

Novel signatures of cancer-associated fibroblasts

(2013) Benedek Bozóky et al.   INTERNATIONAL JOURNAL OF CANCER

Tumour suppressor gene function in carcinoma-associated fibroblasts: from tumour cells via EMT and back again?

(2013) Lauren E Drake et al.   JOURNAL OF PATHOLOGY

The Reactome pathway knowledgebase

(2013) David Croft et al.   NUCLEIC ACIDS RESEARCH

Network enrichment analysis: extension of gene-set enrichment analysis to gene networks

(2012) Andrey Alexeyenko et al.   BMC BIOINFORMATICS

HTRIdb: an open-access database for experimentally verified human transcriptional regulation interactions

(2012) Luiz A Bovolenta et al.   BMC GENOMICS

The architecture of fibroblast monolayers of different origin differentially influences tumor cell growth

(2012) Emilie Flaberg et al.   INTERNATIONAL JOURNAL OF CANCER

Human periprostatic adipose tissue promotes prostate cancer aggressiveness in vitro

(2012) Ricardo Ribeiro et al.   JOURNAL OF EXPERIMENTAL & CLINICAL CANCER RESEARCH

Gene expression analysis of matched ovarian primary tumors and peritoneal metastasis

(2012) Joel A Malek et al.   Journal of Translational Medicine

RhoD regulates cytoskeletal dynamics via the actin nucleation–promoting factor WASp homologue associated with actin Golgi membranes and microtubules

(2012) Annica K. B. Gad et al.   MOLECULAR BIOLOGY OF THE CELL

Cancer-Associated Fibroblasts Drive the Progression of Metastasis through both Paracrine and Mechanical Pressure on Cancer Tissue

(2012) G. S. Karagiannis et al.   MOLECULAR CANCER RESEARCH

Cancer Associated Fibroblasts Exploit Reactive Oxygen Species Through a Proinflammatory Signature Leading to Epithelial Mesenchymal Transition and Stemness

(2011) Elisa Giannoni et al.   ANTIOXIDANTS & REDOX SIGNALING

PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse

(2011) P. V. Hornbeck et al.   NUCLEIC ACIDS RESEARCH

Cancer-Associated Fibroblasts Are Activated in Incipient Neoplasia to Orchestrate Tumor-Promoting Inflammation in an NF-κB-Dependent Manner

(2010) Neta Erez et al.   CANCER CELL

High-throughput live-cell imaging reveals differential inhibition of tumor cell proliferation by human fibroblasts

(2010) Emilie Flaberg et al.   INTERNATIONAL JOURNAL OF CANCER

International network of cancer genome projects

(2010) Thomas J. Hudson (Chairperson) et al.   NATURE

Dynamic Zebrafish Interactome Reveals Transcriptional Mechanisms of Dioxin Toxicity

(2010) Andrey Alexeyenko et al.   PLoS One

Global networks of functional coupling in eukaryotes from comprehensive data integration

(2009) A. Alexeyenko et al.   GENOME RESEARCH

PID: the Pathway Interaction Database

(2008) Carl F. Schaefer et al.   NUCLEIC ACIDS RESEARCH