BLAST output visualization in the new sequencing era

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Evolution before genes

(2012) Vera Vasas et al.   Biology Direct

GuiTope: an application for mapping random-sequence peptides to protein sequences

(2012) Rebecca F Halperin et al.   BMC BIOINFORMATICS

A beginner's guide to eukaryotic genome annotation

(2012) Mark Yandell et al.   NATURE REVIEWS GENETICS

Venom gland transcriptomes of two elapid snakes (Bungarus multicinctus and Naja atra) and evolution of toxin genes

(2011) Yu Jiang et al.   BMC GENOMICS

Ortholog identification in the presence of domain architecture rearrangement

(2011) K. Sjolander et al.   BRIEFINGS IN BIOINFORMATICS

Analysis of two marine metagenomes reveals the diversity of plasmids in oceanic environments

(2011) Yingfei Ma et al.   ENVIRONMENTAL MICROBIOLOGY

KEGG for integration and interpretation of large-scale molecular data sets

(2011) M. Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Circoletto: visualizing sequence similarity with Circos

(2010) N. Darzentas   BIOINFORMATICS

Genome size differentiates co-occurring populations of the planktonic diatom Ditylum brightwellii (Bacillariophyta)

(2010) Julie A Koester et al.   BMC EVOLUTIONARY BIOLOGY

NOBLAST and JAMBLAST: New Options for BLAST and a Java Application Manager for BLAST results

(2009) Jacques Lagnel et al.   BIOINFORMATICS

Regularized gene selection in cancer microarray meta-analysis

(2009) Shuangge Ma et al.   BMC BIOINFORMATICS

Sequence context-specific profiles for homology searching

(2009) A. Biegert et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide analysis of the interaction between the endosymbiotic bacterium Wolbachia and its Drosophila host

(2008) Zhiyong Xi et al.   BMC GENOMICS

ASTD: The Alternative Splicing and Transcript Diversity database

(2008) Gautier Koscielny et al.   GENOMICS