The impact of taxon sampling on phylogenetic inference: a review of two decades of controversy

The Phylogenetic Position of Myxozoa: Exploring Conflicting Signals in Phylogenomic and Ribosomal Data Sets

(2010) N. M. Evans et al.   MOLECULAR BIOLOGY AND EVOLUTION

The importance of taxon sampling in genomic studies: An example from the cyclooxygenases of teleost fishes

(2010) Justin C. Havird et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

When phylogenetic assumptions are violated: base compositional heterogeneity and among-site rate variation in beetle mitochondrial phylogenomics

(2010) HOJUN SONG et al.   SYSTEMATIC ENTOMOLOGY

The Impact of Outgroup Choice and Missing Data on Major Seed Plant Phylogenetics Using Genome-Wide EST Data

(2009) Jose Eduardo de la Torre-Bárcena et al.   PLoS One

The Effect of Ambiguous Data on Phylogenetic Estimates Obtained by Maximum Likelihood and Bayesian Inference

(2009) Alan R. Lemmon et al.   SYSTEMATIC BIOLOGY

Relaxed Molecular Clocks, the Bias–Variance Trade-off, and the Quality of Phylogenetic Inference

(2009) Joel O. Wertheim et al.   SYSTEMATIC BIOLOGY

Gene tree discordance, phylogenetic inference and the multispecies coalescent

(2009) James H. Degnan et al.   TRENDS IN ECOLOGY & EVOLUTION

An even “newer” animal phylogeny

(2008) Rob DeSalle et al.   BIOESSAYS

Automated simultaneous analysis phylogenetics (ASAP): an enabling tool for phlyogenomics

(2008) Indra Sarkar et al.   BMC BIOINFORMATICS

The phylogeny of Cetartiodactyla: The importance of dense taxon sampling, missing data, and the remarkable promise of cytochrome b to provide reliable species-level phylogenies

(2008) Ingi Agnarsson et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Broad phylogenomic sampling improves resolution of the animal tree of life

(2008) Casey W. Dunn et al.   NATURE