GO-function: deriving biologically relevant functions from statistically significant functions

Gene function prediction using semantic similarity clustering and enrichment analysis in the malaria parasite Plasmodium falciparum

(2010) Philip M. R. Tedder et al.   BIOINFORMATICS

Assigning roles to DNA regulatory motifs using comparative genomics

(2010) Fabian A. Buske et al.   BIOINFORMATICS

Consistency, comprehensiveness, and compatibility of pathway databases

(2010) Donny Soh et al.   BMC BIOINFORMATICS

GOAL: A software tool for assessing biological significance of genes groups

(2010) Alain B Tchagang et al.   BMC BIOINFORMATICS

Polymorphisms of XRCC4 are involved in reduced colorectal cancer risk in Chinese schizophrenia patients

(2010) Yang Wang et al.   BMC CANCER

A ‘metastasis-prone’ signature for early-stage mismatch-repair proficient sporadic colorectal cancer patients and its implications for possible therapeutics

(2010) Yi Hong et al.   CLINICAL & EXPERIMENTAL METASTASIS

Systematic Interpretation of Comutated Genes in Large-Scale Cancer Mutation Profiles

(2010) Yunyan Gu et al.   MOLECULAR CANCER THERAPEUTICS

GOing Bayesian: model-based gene set analysis of genome-scale data

(2010) Sebastian Bauer et al.   NUCLEIC ACIDS RESEARCH

Mutation analysis of the AATF gene in breast cancer families

(2009) Maria Haanpää et al.   BMC CANCER

Immunological Profiles of Bos taurus and Bos indicus Cattle Infested with the Cattle Tick, Rhipicephalus (Boophilus) microplus

(2009) E. K. Piper et al.   Clinical and Vaccine Immunology

Finding disease-specific coordinated functions by multi-function genes: Insight into the coordination mechanisms in diseases

(2009) Wencai Ma et al.   GENOMICS

Apparently low reproducibility of true differential expression discoveries in microarray studies

(2008) Min Zhang et al.   BIOINFORMATICS

Combinatorial patterns of somatic gene mutations in cancer

(2008) Chen-Hsiang Yeang et al.   FASEB JOURNAL

A probabilistic generative model for GO enrichment analysis

(2008) Yong Lu et al.   NUCLEIC ACIDS RESEARCH

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH