Article
Chemistry, Multidisciplinary
Ran Ding, Qiwei Liu, Jing Yu, Yongkang Wang, Honglei Gao, Hongxing Kan, Yinfeng Yang
Summary: This study aimed to identify breast cancer (BC) subtype clusters and crucial gene classifier prognostic signatures by integrating genomic analysis with the tumor immune microenvironment (TME). The results showed that TCGA-BC samples could be divided into three subtype clusters, with S2 having a poorer prognosis and S1 and S3 having better prognoses. Three key pathways and 10 crucial prognostic-related gene signatures were screened. Single-cell analysis revealed that S1 samples showed the most types of immune cells, S2 samples were more sensitive to tumor treatment drugs and enriched with more neutrophils, while more multilymphoid progenitor cells were involved in subtype cluster S3. The findings provide a basis for the clinical precision treatment of BC.
Article
Oncology
Ruo Qi Li, Wei Wang, Lei Yan, Li Ying Song, Xin Guan, Wei Zhang, Jing Lian
Summary: This study identified breast cancer-associated antigens CD74, IRF1, and PSME2, and confirmed the existence of three different immune subtypes among breast cancer patients. Biomarkers for assessing vaccination suitability were also discovered, along with predicted drugs suitable for patients unsuited for vaccination. These findings provide new directions for the development of mRNA vaccines against breast cancer.
FRONTIERS IN ONCOLOGY
(2022)
Article
Immunology
Yanling Zhou, Liang Xiao, Guo Long, Jing Cao, Shuang Liu, Yongguang Tao, Ledu Zhou, Jianing Tang
Summary: This study identified different molecular subtypes of breast cancer based on the expression profiles of cellular senescence-related genes (SRGs) and established a senescence-related scoring signature that can predict the prognosis of breast cancer patients. The accuracy of this signature was validated and it was found to be associated with pathological response rate. The study also revealed the potential roles of these senescence patterns in the tumor-immune-stromal microenvironment.
FRONTIERS IN IMMUNOLOGY
(2022)
Review
Oncology
Miquel Ensenyat-Mendez, Pere Llinas-Arias, Javier I. J. Orozco, Sandra iniguez-Munoz, Matthew P. Salomon, Borja Sese, Maggie L. DiNome, Diego M. Marzese
Summary: TNBC is a highly heterogeneous disease lacking targeted treatment options, emphasizing the need for improved stratification systems. New methodologies such as microarray technology and high-throughput sequencing have allowed for the characterization of TNBC subtypes, but challenges remain in integrating diverse molecular data and implementing cost-effective classification methods. The application of artificial intelligence in translational oncology shows promise in identifying definitive TNBC subtypes.
FRONTIERS IN ONCOLOGY
(2021)
Article
Computer Science, Artificial Intelligence
Ali M. Hasan, Noor K. N. Al-Waely, Hadeel K. Aljobouri, Hamid A. Jalab, Rabha W. Ibrahim, Farid Meziane
Summary: Breast cancer is a highly concerning disease worldwide, and the use of dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) in breast cancer evaluation is increasing. This study focuses on using breast DCE-MRI to identify molecular subtypes, providing breast cancer patients with a better chance for an early and effective treatment plan.
EXPERT SYSTEMS WITH APPLICATIONS
(2024)
Article
Oncology
Christina Horr, Steven A. Buechler
Summary: Breast cancer exhibits heterogeneity in prognoses and drug responses, with the Breast Cancer Consensus Subtypes (BCCS) providing a classification based on gene expression independent of statistical methodology. Seven BCCS subtypes were identified, including estrogen receptor-positive and negative subtypes, as well as unclassified tumors.
Article
Oncology
Yuhao Xu, Qinghui Zheng, Tao Zhou, Buyun Ye, Qiuran Xu, Xuli Meng
Summary: This study constructed a stable necroptosis-related long non-coding RNA (lncRNA) model, which served as an independent prognostic factor for breast cancer (BRCA). The low-risk group appeared to be immune-activated type. Furthermore, it was found that the higher the tumor mutation burden (TMB), the higher the risk score. PD-L1-CTLA4 combined immunotherapy was identified as a promising treatment strategy. Lastly, patients were divided into 4 clusters to better understand the heterogeneity among patients.
FRONTIERS IN ONCOLOGY
(2022)
Article
Biochemistry & Molecular Biology
Jean Schneider, Ye Won Jeon, Young Jin Suh, Seung Taek Lim
Summary: The combination treatment of ruxolitinib and calcitriol had a synergistic anticancer effect on SKBR3 and MDA-MB-468 cells, inhibiting cell proliferation, inducing apoptosis, causing cell cycle arrest, and altering the expression of cell signaling proteins. This synergistic antitumor effect was also observed in MDA-MB-468 xenograft mouse model, without significant drug toxicity. The combination exhibited a synergistic effect in HER2-enriched and triple-negative breast cancer subtypes.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Review
Pharmacology & Pharmacy
A. SEYFETTIN, I. DEDE, S. HAKVERDI, B. D. U. Z. E. L. ASIG, M. TEMIZ, S. KARAZINCIR
Summary: This study investigated the MR imaging features of breast cancer molecular subtypes according to the BIRADS Atlas. Different molecular subtypes showed significant differences in mass/non-mass enhancement, shape, contour, and axillary lymphadenopathy rates in MRI imaging.
EUROPEAN REVIEW FOR MEDICAL AND PHARMACOLOGICAL SCIENCES
(2022)
Article
Oncology
Qi Chen, Cheng-Bin Duan, Ye Huang, Kun Liu
Summary: This study aimed to explore the clinicopathological characteristics and molecular subtype features of breast cancer in high-altitude regions. The study found that breast cancer patients in high-altitude regions had longer patient delay, larger tumor size, and higher lymph node metastasis rate. Additionally, there was a significant difference in the distribution of molecular subtypes between high-altitude and low-altitude regions.
FRONTIERS IN ONCOLOGY
(2023)
Article
Multidisciplinary Sciences
Takuma Shibahara, Chisa Wada, Yasuho Yamashita, Kazuhiro Fujita, Masamichi Sato, Junichi Kuwata, Atsushi Okamoto, Yoshimasa Ono
Summary: Deep learning can accurately predict the intrinsic subtypes of breast cancer, but it has not been used directly to study the genes associated with each subtype. We developed an explainable deep learning model, the point-wise linear (PWL) model, to analyze the importance of feature variables. Our study demonstrates the clinical benefits of analyzing breast cancer subtypes and validates the capability of the PWL model.
Article
Oncology
Shahin Sayed, Shaoqi Fan, Zahir Moloo, Ronald Wasike, Peter Bird, Mansoor Saleh, Asim Jamal Shaikh, Jonine D. Figueroa, Richard Naidoo, Francis W. Makokha, Kevin Gardner, Raymond Oigara, Faith Wambui Njoroge, Pumza Magangane, Miriam Mutebi, Rajendra Chauhan, Sitna Mwanzi, Dhirendra Govender, Xiaohong R. Yang
Summary: In a study conducted in Kenya, associations were found between parity-related risk factors and ER status consistent with observations in European ancestry populations, but differing associations with BMI and breastfeeding were observed.
BREAST CANCER RESEARCH
(2021)
Article
Oncology
Jiawei Chen, Shuchen Sun, Leihao Ren, Lingyang Hua, Daijun Wang, Qing Xie, Hans-Georg Wirsching, Jiaojiao Deng, Michael Weller, Ye Gong
Summary: This study investigated the association between m(6)A regulator expression and meningioma molecular subtypes and immune infiltration. Two meningioma clusters were identified based on the expression of 19 m(6)A regulators, and novel molecular subtypes were defined using prognostic hub gene expression. The findings suggest that m(6)A regulator gene expression may serve as a novel prognostic marker in meningioma.
FRONTIERS IN ONCOLOGY
(2021)
Review
Radiology, Nuclear Medicine & Medical Imaging
Nazimah Ab Mumin, Marlina Tanty Ramli Hamid, Jeannie Hsiu Ding Wong, Kartini Rahmat, Kwan Hoong Ng
Summary: This systematic review investigates the role of human extracted MRI phenotypes in classifying molecular subtypes of breast cancer. The results suggest that MRI features can be used to distinguish different subtypes, particularly the triple-negative subtype. However, further research is needed as current evidence is limited.
ACADEMIC RADIOLOGY
(2022)
Article
Oncology
Geffen Kleinstern, Christopher G. Scott, Rulla M. Tamimi, Matthew R. Jensen, V. Shane Pankratz, Kimberly A. Bertrand, Aaron D. Norman, Daniel W. Visscher, Fergus J. Couch, Kathleen Brandt, John Shepherd, Fang-Fang Wu, Yunn-Yi Chen, Steven R. Cummings, Stacey Winham, Karla Kerlikowske, Celine M. Vachon
Summary: The study found that mammographic density measures were associated with the risk of all intrinsic molecular subtypes of breast cancer, but significant interactions between age and density measures may have implications for subtype-specific risk models.
BREAST CANCER RESEARCH AND TREATMENT
(2021)
Review
Cell Biology
Joshua J. X. Li, Gary M. Tse
Summary: This article reviews the clinicopathological features of ER-positive breast cancers, with a focus on ER-low positive breast cancers. It also provides updates on the assessment, reporting, and interpretation of ER immunohistochemical staining, correlations of ER status with other diagnostic and theragnostic markers, as well as implications for treatment selection and response. Despite advancements in IHC and molecular techniques, ER immunostaining remains a core component in the prognostic and theragnostic assessment of breast cancers.
Article
Oncology
Ivan K. Poon, Ronald C. K. Chan, Joseph S. H. Choi, Joanna K. M. Ng, Katsie T. Tang, Yolanda Y. H. Wong, Ka Pang Chan, Wing Ho Yip, Gary M. Tse, Joshua J. X. Li
Summary: This study reviewed matched pleural biopsy and effusion cytology specimens to compare the performance of these two methods. The results suggest that effusion cytology may be better for confirming benignity and diagnosing carcinomatous pleural effusion, while pleural biopsy should be considered for suspected hematolymphoid malignancies and mesothelioma.
Article
Medical Laboratory Technology
Yunbi Ni, Gary M. Tse
Summary: Spindle cell lesions of the breast are a wide range of diseases, from nonneoplastic reactive conditions to high-grade malignant tumors, making diagnosis difficult. This study reviews the classification of breast spindle cell lesions, including clinical features, morphologic characteristics, and the role of immunohistochemistry and molecular tools in assisting differential diagnosis.
ARCHIVES OF PATHOLOGY & LABORATORY MEDICINE
(2023)
Article
Pathology
Joshua J. X. Li, Joanna K. M. Ng, Billy S. W. Lai, Conrad H. C. Lee, Ka-Ho Shea, Julia Y. Y. Tsang, Gary M. M. Tse
Summary: This study reviewed the largest cohort of histologically confirmed aspirates of tubular adenomas and compared them with aspirates of fibroadenomas. The findings further defined the cytological features of tubular adenoma and allowed for differentiation from fibroadenoma.
Article
Oncology
Andreas Karakatsanis, Staffan Eriksson, Lida Pistiolis, Roger Olofsson Bagge, Gyula Nagy, Vivian Man, Ava Kwong, Fredrik Warnberg
Summary: This study demonstrates that marking the SLN with SPIO can avoid overtreatment and allow for accurate d-SLND in patients with DCIS. This is significant for the treatment of patients with DCIS.
ANNALS OF SURGICAL ONCOLOGY
(2023)
Article
Oncology
Joshua J. X. Li, Gary M. Tse
CANCER CYTOPATHOLOGY
(2023)
Article
Oncology
Ava Kwong, Michael Co, Eisuke Fukuma
Summary: This study is a prospective single-arm clinical trial on cryosurgery for early breast cancers, evaluating the expanded criteria for tumors larger than 1.5 cm and non-luminal breast cancers. The results showed that residual cancer was found in 46.7% of patients, all of which were located at the periphery of the cryoablation zone. Careful pre-operative planning and intra-operative monitoring are crucial to ensure complete cryoablation.
CLINICAL BREAST CANCER
(2023)
Review
Cell Biology
Julia Y. Tsang, Gary M. Tse
Summary: TNBC is a major challenge in breast cancer management due to its heterogeneity and diversity. Expression profiling has identified at least four predominant subtypes with specific genomic alterations and tumor microenvironment. Recognizing these subtypes can improve prognosis and guide treatment decisions.
Editorial Material
Oncology
Ivan K. K. Poon, Ronald C. K. Chan, Joseph S. H. Choi, Joanna K. M. Ng, Katsie T. T. Tang, Yolanda Y. H. Wong, Ka Pang Chan, Wing Ho Yip, Gary M. M. Tse, Joshua J. X. Li
Editorial Material
Oncology
Vivian Man, Dacita Suen, Ava Kwong
ANNALS OF SURGICAL ONCOLOGY
(2023)
Article
Oncology
Vivian Man, Dacita Suen, Ava Kwong
ANNALS OF SURGICAL ONCOLOGY
(2023)
Article
Oncology
Vivian Man, Dacita Suen, Ava Kwong
Summary: The study compares the efficacy of superparamagnetic iron oxide (SPIO)-guided and standard techniques for detecting sentinel lymph nodes (SLN) in early breast cancer. Multiple inferiority trials have shown that SPIO is not inferior to conventional techniques in detecting SLNs. The results indicate that single-tracer SPIO-guided SLNB is as effective as the dual technique (radioisotope and blue dye) and can safely replace the gold standard for SLN mapping in early breast cancer.
ANNALS OF SURGICAL ONCOLOGY
(2023)
Article
Pathology
Joshua J. X. Li, Wing Cheung, Joanna K. M. Ng, Gary M. Tse
Summary: The ISRSFC has demonstrated strong diagnostic performance in pericardial fluid cytology. Disease composition and applicable cytological subcategories differ from its peritoneal and pleural counterparts for pericardial effusion. Incorporating immunocytochemistry by an algorithmic approach improves diagnostic accuracy. Cytomorphology is accurate for identifying adenocarcinomas, but further typing necessitates immunocytochemistry.
JOURNAL OF CLINICAL PATHOLOGY
(2023)
Article
Oncology
Wendy Wing Tak Lam, Danielle W. L. Ng, Richard Fielding, Vivian Sin, Catherine Tsang, Wendy W. L. Chan, Chi Chung Foo, Ava Kwong, Karen K. L. Chan
Summary: This study evaluated the feasibility of a nurse-led symptom-screening program in routine oncology post-treatment outpatient clinics. The results showed that this program was acceptable and effective in reducing symptom distress, with a high acceptance rate for community-based psychosocial support services.
Review
Cell Biology
Joshua J. X. Li, Gary M. Tse
Summary: This review summarizes the applications of immunocytochemistry-detection of carcinoma cells, confirmation of breast primary, assessment of surrogate immunostains and theragnostic biomarkers, with discussion on potential diagnostic pitfalls, followed by the application of molecular tests and digital cytopathologic techniques for assessing metastatic breast carcinoma in cytology.