Historical contingency and the gradual evolution of metabolic properties in central carbon and genome-scale metabolisms

A latent capacity for evolutionary innovation through exaptation in metabolic systems

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Glycolytic strategy as a tradeoff between energy yield and protein cost

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Constraint and Contingency in Multifunctional Gene Regulatory Circuits

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Rethinking glycolysis: on the biochemical logic of metabolic pathways

(2012) Arren Bar-Even et al.   Nature Chemical Biology

Design Constraints on a Synthetic Metabolism

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Superessential reactions in metabolic networks

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Genotype networks, innovation, and robustness in sulfur metabolism

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Topological Structure of the Space of Phenotypes: The Case of RNA Neutral Networks

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Genotype networks in metabolic reaction spaces

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Central Carbon Metabolism as a Minimal Biochemical Walk between Precursors for Biomass and Energy

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Design and analysis of synthetic carbon fixation pathways

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The Systemic Imprint of Growth and Its Uses in Ecological (Meta)Genomics

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Host-symbiont co-speciation and reductive genome evolution in gut symbiotic bacteria of acanthosomatid stinkbugs

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A fragile metabolic network adapted for cooperation in the symbiotic bacterium Buchnera aphidicola

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Evolutionary Plasticity and Innovations in Complex Metabolic Reaction Networks

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The Protein Folding Problem

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The regulatory network of E. coli metabolism as a Boolean dynamical system exhibits both homeostasis and flexibility of response

(2008) Areejit Samal et al.   BMC Systems Biology