The logic layout of the TOL network of Pseudomonas putida pWW0 plasmid stems from a metabolic amplifier motif (MAM) that optimizes biodegradation of m-xylene

The logicome of environmental bacteria: merging catabolic and regulatory events with Boolean formalisms

(2011) Rafael Silva-Rocha et al.   ENVIRONMENTAL MICROBIOLOGY

A composite feed-forward loop I4-FFL involving IHF and Crc stabilizes expression of the XylR regulator of Pseudomonas putida mt-2 from growth phase perturbations

(2011) Rafael Silva-Rocha et al.   Molecular BioSystems

The Crc Global Regulator Inhibits thePseudomonas putidapWW0 Toluene/Xylene Assimilation Pathway by Repressing the Translation of Regulatory and Structural Genes

(2010) Renata Moreno et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The Carbon Assimilation Network in Escherichia coli Is Densely Connected and Largely Sign-Determined by Directions of Metabolic Fluxes

(2010) Valentina Baldazzi et al.   PLoS Computational Biology

Competition favours reduced cost of plasmids to host bacteria

(2009) Rembrandt J F Haft et al.   ISME Journal

Roles of Effectors in XylS-Dependent Transcription Activation: Intramolecular Domain Derepression and DNA Binding

(2008) P. Dominguez-Cuevas et al.   JOURNAL OF BACTERIOLOGY

Transcriptionalwiringof the TOL plasmid regulatory network to its host involves the submission of the σ54-promoterPuto the response regulator PprA

(2008) Elena Vitale et al.   MOLECULAR MICROBIOLOGY