Chilling acclimation provides immunity to stress by altering regulatory networks and inducing genes with protective functions in Cassava

A chloroplast-targeted DnaJ protein contributes to maintenance of photosystem II under chilling stress

(2013) Fanying Kong et al.   JOURNAL OF EXPERIMENTAL BOTANY

ACYL-LIPID DESATURASE2 Is Required for Chilling and Freezing Tolerance in Arabidopsis

(2013) M. Chen et al.   PLANT CELL

Heat Shock-Induced Accumulation of Translation Elongation and Termination Factors Precedes Assembly of Stress Granules in S. cerevisiae

(2013) Tomas Grousl et al.   PLoS One

Ectopic Overexpression of SsCBF1, a CRT/DRE-Binding Factor from the Nightshade Plant Solanum lycopersicoides, Confers Freezing and Salt Tolerance in Transgenic Arabidopsis

(2013) Lili Zhang et al.   PLoS One

Protein Similarity Networks Reveal Relationships among Sequence, Structure, and Function within the Cupin Superfamily

(2013) Richard Uberto et al.   PLoS One

Global Expression Profiling of Low Temperature Induced Genes in the Chilling Tolerant Japonica Rice Jumli Marshi

(2013) Aakash Chawade et al.   PLoS One

Transcriptome profiling of low temperature-treated cassava apical shoots showed dynamic responses of tropical plant to cold stress

(2012) Dong An et al.   BMC GENOMICS

Comparative analyses reveal potential uses of Brachypodium distachyon as a model for cold stress responses in temperate grasses

(2012) Chuan Li et al.   BMC PLANT BIOLOGY

ArabidopsisROP-interactive CRIB motif-containing protein 1 (RIC1) positively regulates auxin signalling and negatively regulates abscisic acid (ABA) signalling during root development

(2012) YUNJUNG CHOI et al.   PLANT CELL AND ENVIRONMENT

Proteomic Study of Low-Temperature Responses in Strawberry Cultivars (Fragaria x ananassa) That Differ in Cold Tolerance

(2012) G. Koehler et al.   PLANT PHYSIOLOGY

Comparative Transcriptome Profiling of Chilling Stress Responsiveness in Two Contrasting Rice Genotypes

(2012) Ting Zhang et al.   PLoS One

Functional and Transcriptome Analysis Reveals an Acclimatization Strategy for Abiotic Stress Tolerance Mediated by Arabidopsis NF-YA Family Members

(2012) Marco Antonio Leyva-González et al.   PLoS One

Mutual protection of ribosomal proteins L5 and L11 from degradation is essential for p53 activation upon ribosomal biogenesis stress

(2012) S. Bursac et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide ribosome profiling reveals complex translational regulation in response to oxidative stress

(2012) M. V. Gerashchenko et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Correlation networks visualization

(2012) Nicholas Provart   Frontiers in Plant Science

Engineering Cold Stress Tolerance in Crop Plants

(2011) Gulzar S. Sanghera et al.   CURRENT GENOMICS

Hydrophilic Residues Are Crucial for Ribosomal Protein L11 (RPL11) Interaction with Zinc Finger Domain of MDM2 and p53 Protein Activation

(2011) Qi Zhang et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A comparison of the low temperature transcriptomes and CBF regulons of three plant species that differ in freezing tolerance: Solanum commersonii, Solanum tuberosum, and Arabidopsis thaliana

(2011) Marcela A. Carvallo et al.   JOURNAL OF EXPERIMENTAL BOTANY

Phytozome: a comparative platform for green plant genomics

(2011) David M. Goodstein et al.   NUCLEIC ACIDS RESEARCH

Transcriptional regulatory network triggered by oxidative signals configures the early response mechanisms of japonica rice to chilling stress

(2010) Kil-Young Yun et al.   BMC PLANT BIOLOGY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Origin and evolution of peptide-modifying dioxygenases and identification of the wybutosine hydroxylase/hydroperoxidase

(2010) L. M. Iyer et al.   NUCLEIC ACIDS RESEARCH

Plant L10 Ribosomal Proteins Have Different Roles during Development and Translation under Ultraviolet-B Stress

(2010) M. L. F. Ferreyra et al.   PLANT PHYSIOLOGY

H2A.Z-Containing Nucleosomes Mediate the Thermosensory Response in Arabidopsis

(2009) S. Vinod Kumar et al.   CELL

Roles for Arabidopsis CAMTA Transcription Factors in Cold-Regulated Gene Expression and Freezing Tolerance

(2009) C. J. Doherty et al.   PLANT CELL

The Phytochrome-Interacting Factor PIF7 Negatively Regulates DREB1 Expression under Circadian Control in Arabidopsis

(2009) S. Kidokoro et al.   PLANT PHYSIOLOGY

Phenotypic Plasticity in Photosynthetic Temperature Acclimation among Crop Species with Different Cold Tolerances

(2009) W. Yamori et al.   PLANT PHYSIOLOGY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Natural variation in CBF gene sequence, gene expression and freezing tolerance in the Versailles core collection of Arabidopsis thaliana

(2008) Heather I Mckhann et al.   BMC PLANT BIOLOGY

RNA under attack: Cellular handling of RNA damage

(2008) Elisabeth J. Wurtmann et al.   CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY

Natural genetic variation in acclimation capacity at sub-zero temperatures after cold acclimation at 4°C in different Arabidopsis thaliana accessions

(2008) Mai Q. Le et al.   CRYOBIOLOGY

Identification of ICE2, a gene involved in cold acclimation which determines freezing tolerance in Arabidopsis thaliana

(2008) Oksana V. Fursova et al.   GENE

A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains

(2008) Q.-H. Zhu et al.   GENOME RESEARCH

Multilevel genomic analysis of the response of transcripts, enzyme activities and metabolites in Arabidopsis rosettes to a progressive decrease of temperature in the non-freezing range

(2008) BJÖRN USADEL et al.   PLANT CELL AND ENVIRONMENT