An EST-based analysis identifies new genes and reveals distinctive gene expression features of Coffea arabica and Coffea canephora

Comparative sequence analyses indicate that Coffea (Asterids) and Vitis (Rosids) derive from the same paleo-hexaploid ancestral genome

(2010) Alberto Cenci et al.   MOLECULAR GENETICS AND GENOMICS

A High-Throughput Data Mining of Single Nucleotide Polymorphisms in Coffea Species Expressed Sequence Tags Suggests Differential Homeologous Gene Expression in the Allotetraploid Coffea arabica

(2010) R. O. Vidal et al.   PLANT PHYSIOLOGY

FrameDP: sensitive peptide detection on noisy matured sequences

(2009) J. Gouzy et al.   BIOINFORMATICS

Phylogenomic analysis of the cystatin superfamily in eukaryotes and prokaryotes

(2009) Dušan Kordiš et al.   BMC EVOLUTIONARY BIOLOGY

A new set of ESTs and cDNA clones from full-length and normalized libraries for gene discovery and functional characterization in citrus

(2009) M Carmen Marques et al.   BMC GENOMICS

Identification of suitable internal control genes for expression studies in Coffea arabica under different experimental conditions

(2009) Carla F Barsalobres-Cavallari et al.   BMC MOLECULAR BIOLOGY

Microcollinearity in an ethylene receptor coding gene region of the Coffea canephora genome is extensively conserved with Vitis vinifera and other distant dicotyledonous sequenced genomes

(2009) Romain Guyot et al.   BMC PLANT BIOLOGY

Population Genetics of Fungal and Oomycete Effectors Involved in Gene-for-Gene Interactions

(2009) Eva H. Stukenbrock et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Metabolic pathways in tropical dicotyledonous albuminous seeds: Coffea arabica as a case study

(2009) Thierry Joët et al.   NEW PHYTOLOGIST

MEROPS: the peptidase database

(2009) Neil D. Rawlings et al.   NUCLEIC ACIDS RESEARCH

Plant defensins—Prospects for the biological functions and biotechnological properties

(2009) André de Oliveira Carvalho et al.   PEPTIDES

Constitutive Expression of a Trypsin Protease Inhibitor Confers Multiple Stress Tolerance in Transgenic Tobacco

(2009) Tantravahi Srinivasan et al.   PLANT AND CELL PHYSIOLOGY

The promoter of a gene encoding an isoflavone reductase-like protein in coffee (Coffea arabica) drives a stress-responsive expression in leaves

(2009) Marcos Brandalise et al.   PLANT CELL REPORTS

Regulation and processing of a plant peptide hormone, AtRALF23, in Arabidopsis

(2009) Renu Srivastava et al.   PLANT JOURNAL

The RNA Hydrolysis and the Cytokinin Binding Activities of PR-10 Proteins Are Differently Performed by Two Isoforms of the Pru p 1 Peach Major Allergen and Are Possibly Functionally Related

(2009) P. Zubini et al.   PLANT PHYSIOLOGY

Characterization of the Entire Cystatin Gene Family in Barley and Their Target Cathepsin L-Like Cysteine-Proteases, Partners in the Hordein Mobilization during Seed Germination

(2009) M. Martinez et al.   PLANT PHYSIOLOGY

An O-Acetylserine(thiol)lyase Homolog with L-Cysteine Desulfhydrase Activity Regulates Cysteine Homeostasis in Arabidopsis

(2009) C. Alvarez et al.   PLANT PHYSIOLOGY

Characterization and Expression Analysis of Genes Directing Galactomannan Synthesis in Coffee

(2008) Martial Pré et al.   ANNALS OF BOTANY

The origin and evolution of plant cystatins and their target cysteine proteinases indicate a complex functional relationship

(2008) Manuel Martinez et al.   BMC EVOLUTIONARY BIOLOGY

Towards the understanding of the cocoa transcriptome: Production and analysis of an exhaustive dataset of ESTs of Theobroma cacao L. generated from various tissues and under various conditions

(2008) Xavier Argout et al.   BMC GENOMICS

High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome

(2008) Evandro Novaes et al.   BMC GENOMICS

A conserved dibasic site is essential for correct processing of the peptide hormone AtRALF1 inArabidopsis thaliana

(2008) Juliana L. Matos et al.   FEBS LETTERS

Comparative Proteomical Analysis of Zygotic Embryo and Endosperm from Coffea arabica Seeds

(2008) Lívia L. Koshino et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Peach (Prunus persica L. Batsch) Allergen-Encoding Genes Are Developmentally Regulated and Affected by Fruit Load and Light Radiation

(2008) Alessandro Botton et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Comprehensive Functional Analysis of the Catalase Gene Family inArabidopsis thaliana

(2008) Yan-Yan Du et al.   Journal of Integrative Plant Biology

Transposable elements in Coffea (Gentianales: Rubiacea) transcripts and their role in the origin of protein diversity in flowering plants

(2008) Fabrício Ramon Lopes et al.   MOLECULAR GENETICS AND GENOMICS

Differential regulation of grain sucrose accumulation and metabolism in Coffea arabica (Arabica) and Coffea canephora (Robusta) revealed through gene expression and enzyme activity analysis

(2008) Isabelle Privat et al.   NEW PHYTOLOGIST

Insights into corn genes derived from large-scale cDNA sequencing

(2008) Nickolai N. Alexandrov et al.   PLANT MOLECULAR BIOLOGY

Finding and Comparing Syntenic Regions among Arabidopsis and the Outgroups Papaya, Poplar, and Grape: CoGe with Rosids

(2008) E. Lyons et al.   PLANT PHYSIOLOGY

Galactinol and Raffinose Constitute a Novel Function to Protect Plants from Oxidative Damage

(2008) A. Nishizawa et al.   PLANT PHYSIOLOGY

Plant pathogenesis-related (PR) proteins: A focus on PR peptides

(2008) Jan Sels et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Arabidopsis TAO1 is a TIR-NB-LRR protein that contributes to disease resistance induced by the Pseudomonas syringae effector AvrB

(2008) T. K. Eitas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA