Detection of phase-dependent transcriptomic changes and Rubisco-mediated CO2 fixation into poly (3-hydroxybutyrate) under heterotrophic condition in Ralstonia eutropha H16 based on RNA-seq and gene deletion analyses

Whole-Genome Microarray and Gene Deletion Studies Reveal Regulation of the Polyhydroxyalkanoate Production Cycle by the Stringent Response in Ralstonia eutropha H16

(2012) Christopher J. Brigham et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Localization of Poly(3-Hydroxybutyrate) (PHB) Granule-Associated Proteins during PHB Granule Formation and Identification of Two New Phasins, PhaP6 and PhaP7, in Ralstonia eutropha H16

(2012) D. Pfeiffer et al.   JOURNAL OF BACTERIOLOGY

Versatile Metabolic Adaptations ofRalstonia eutrophaH16 to a Loss of PdhL, the E3 Component of the Pyruvate Dehydrogenase Complex

(2011) Matthias Raberg et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization and Functional Analyses ofR-Specific Enoyl Coenzyme A Hydratases in Polyhydroxyalkanoate-Producing Ralstonia eutropha

(2011) Yui Kawashima et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effects of Homologous Phosphoenolpyruvate-Carbohydrate Phosphotransferase System Proteins on Carbohydrate Uptake and Poly(3-Hydroxybutyrate) Accumulation in Ralstonia eutropha H16

(2011) Chlud Kaddor et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Production of Poly(3-Hydroxybutyrate-co-3-Hydroxyhexanoate) from Plant Oil by Engineered Ralstonia eutropha Strains

(2011) Charles F. Budde et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Review Application of RNA-seq to reveal the transcript profile in bacteria

(2011) A.C. Pinto et al.   GENETICS AND MOLECULAR RESEARCH

Interaction between poly(3-hydroxybutyrate) granule-associated proteins as revealed by two-hybrid analysis and identification of a new phasin in Ralstonia eutropha H16

(2011) D. Pfeiffer et al.   MICROBIOLOGY-SGM

Impact of Multiple  -Ketothiolase Deletion Mutations in Ralstonia eutropha H16 on the Composition of 3-Mercaptopropionic Acid-Containing Copolymers

(2010) N. Lindenkamp et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Roles of Multiple Acetoacetyl Coenzyme A Reductases in Polyhydroxybutyrate Biosynthesis in Ralstonia eutropha H16

(2010) C. F. Budde et al.   JOURNAL OF BACTERIOLOGY

Elucidation of  -Oxidation Pathways in Ralstonia eutropha H16 by Examination of Global Gene Expression

(2010) C. J. Brigham et al.   JOURNAL OF BACTERIOLOGY

Genome-wide transcriptome analyses of the 'Knallgas' bacterium Ralstonia eutropha H16 with regard to polyhydroxyalkanoate metabolism

(2010) K. Peplinski et al.   MICROBIOLOGY-SGM

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Microbial Synthesis of Poly((R)-3-hydroxybutyrate-co- 3-hydroxypropionate) from Unrelated Carbon Sources by Engineered Cupriavidus necator

(2009) Toshiaki Fukui et al.   BIOMACROMOLECULES

Transcriptomic and metabolomic profiling of Zymomonas mobilis during aerobic and anaerobic fermentations

(2009) Shihui Yang et al.   BMC GENOMICS

Polyhydroxyalkanoate Granules Are Complex Subcellular Organelles (Carbonosomes)

(2009) D. Jendrossek   JOURNAL OF BACTERIOLOGY

Ralstonia eutropha H16 Flagellation Changes According to Nutrient Supply and State of Poly(3-Hydroxybutyrate) Accumulation

(2008) M. Raberg et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays

(2008) J. C. Marioni et al.   GENOME RESEARCH

Next-generation DNA sequencing

(2008) Jay Shendure et al.   NATURE BIOTECHNOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

Production of renewable polymers from crop plants

(2008) Jan B. van Beilen et al.   PLANT JOURNAL