STATAWAARS: a promoter motif associated with spatial expression in the major effector-producing tissues of the plant-parasitic nematode Bursaphelenchus xylophilus

Opening the Effector Protein Toolbox for Plant–Parasitic Cyst Nematode Interactions

(2016) Sebastian Eves-van den Akker et al.   Molecular Plant

Identification and characterization of parasitism genes from the pinewood nematodeBursaphelenchus xylophilusreveals a multilayered detoxification strategy

(2015) Margarida Espada et al.   MOLECULAR PLANT PATHOLOGY

NCBI BLAST+ integrated into Galaxy

(2015) Peter J. A. Cock et al.   GigaScience

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Genomic characterisation of the effector complement of the potato cyst nematode Globodera pallida

(2014) Peter Thorpe et al.   BMC GENOMICS

Signatures of adaptation to plant parasitism in nematode genomes

(2014) DAVID McK. BIRD et al.   PARASITOLOGY

New Plant-Parasitic Nematode from the Mostly Mycophagous Genus Bursaphelenchus Discovered inside Figs in Japan

(2014) Natsumi Kanzaki et al.   PLoS One

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Secretome Analysis of the Pine Wood Nematode Bursaphelenchus xylophilus Reveals the Tangled Roots of Parasitism and Its Potential for Molecular Mimicry

(2013) Ryoji Shinya et al.   PLoS One

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Isolation of Whole Esophageal Gland Cells from Plant-Parasitic Nematodes for Transcriptome Analyses and Effector Identification

(2012) Tom R. Maier et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Effector proteins that modulate plant–insect interactions

(2011) Saskia A Hogenhout et al.   CURRENT OPINION IN PLANT BIOLOGY

Pine Wilt Disease: a threat to European forestry

(2011) Cláudia Vicente et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Functional roles of effectors of plant-parasitic nematodes

(2011) Annelies Haegeman et al.   GENE

Molecular properties of a venom allergen-like protein suggest a parasitic function in the pinewood nematode Bursaphelenchus xylophilus

(2011) Jae Soon Kang et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Genomic Insights into the Origin of Parasitism in the Emerging Plant Pathogen Bursaphelenchus xylophilus

(2011) Taisei Kikuchi et al.   PLoS Pathogens

Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities

(2010) Sven Heinz et al.   MOLECULAR CELL

Identification of putative expansin-like genes from the pine wood nematode, Bursaphelenchus xylophilus, and evolution of the expansin gene family within the Nematoda

(2009) Taisei Kikuchi et al.   NEMATOLOGY

A phylogenetic tree of nematodes based on about 1200 full-length small subunit ribosomal DNA sequences

(2009) Hanny van Megen et al.   NEMATOLOGY

Bursaphelenchus xylophilus: opportunities in comparative genomics and molecular host–parasite interactions

(2008) JOHN T. JONES et al.   MOLECULAR PLANT PATHOLOGY