Metagenomics reveals that detoxification systems are underrepresented in marine bacterial communities

Pfam: the protein families database

(2013) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Ecogenomic Perspectives on Domains of Unknown Function: Correlation-Based Exploration of Marine Metagenomes

(2013) Pier Luigi Buttigieg et al.   PLoS One

Molecular evolution of hydrogen peroxide degrading enzymes

(2012) Marcel Zámocký et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

Evolution of Saxitoxin Synthesis in Cyanobacteria and Dinoflagellates

(2012) Jeremiah D. Hackett et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genomic Potential of Marinobacter aquaeolei, a Biogeochemical “Opportunitroph”

(2011) Esther Singer et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metagenomics and the protein universe

(2011) Adam Godzik   CURRENT OPINION IN STRUCTURAL BIOLOGY

Pyrosequencing of Antibiotic-Contaminated River Sediments Reveals High Levels of Resistance and Gene Transfer Elements

(2011) Erik Kristiansson et al.   PLoS One

Trait Variation in Yeast Is Defined by Population History

(2011) Jonas Warringer et al.   PLoS Genetics

Characterization of Cyanate Metabolism in MarineSynechococcusandProchlorococcusspp.

(2010) Nina A. Kamennaya et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Analysis of membrane proteins in metagenomics: Networks of correlated environmental features and protein families

(2010) P. V. Patel et al.   GENOME RESEARCH

Comparative genomics reveals a deep-sea sediment-adapted life style of Pseudoalteromonas sp. SM9913

(2010) Qi-Long Qin et al.   ISME Journal

Metagenomic insights into evolution of a heavy metal-contaminated groundwater microbial community

(2010) Christopher L Hemme et al.   ISME Journal

Neurotoxic Alkaloids: Saxitoxin and Its Analogs

(2010) Maria Wiese et al.   Marine Drugs

Genomic and functional adaptation in surface ocean planktonic prokaryotes

(2010) Shibu Yooseph et al.   NATURE

Complications with remediation strategies involving the biodegradation and detoxification of recalcitrant contaminant aromatic hydrocarbons

(2010) Max Frenzel et al.   SCIENCE OF THE TOTAL ENVIRONMENT

ShotgunFunctionalizeR: an R-package for functional comparison of metagenomes

(2009) Erik Kristiansson et al.   BIOINFORMATICS

Analysis and comparison of very large metagenomes with fast clustering and functional annotation

(2009) Weizhong Li   BMC BIOINFORMATICS

Occurrence, phylogeny, structure, and function of catalases and peroxidases in cyanobacteria

(2009) Margit Bernroitner et al.   JOURNAL OF EXPERIMENTAL BOTANY

Biogeography of Photosynthetic Light-Harvesting Genes in Marine Phytoplankton

(2009) Thomas S. Bibby et al.   PLoS One

An Atlas of the Thioredoxin Fold Class Reveals the Complexity of Function-Enabling Adaptations

(2009) Holly J. Atkinson et al.   PLoS Computational Biology

Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter

(2008) Elena Ivars-Martinez et al.   ISME Journal

Discovering Functional Novelty in Metagenomes: Examples from Light-Mediated Processes

(2008) A. H. Singh et al.   JOURNAL OF BACTERIOLOGY

A New Family of Cyanobacterial Penicillin-binding Proteins

(2008) Carole Urbach et al.   JOURNAL OF BIOLOGICAL CHEMISTRY