Interspecific and intraspecific gene variability in a 1-Mb region containing the highest density of NBS-LRR genes found in the melon genome

SVAMP: sequence variation analysis, maps and phylogeny

(2014) Raeece Naeem et al.   BIOINFORMATICS

Genome-wide comparative analysis of NBS-encoding genes between Brassica species and Arabidopsis thaliana

(2014) Jingyin Yu et al.   BMC GENOMICS

Loss/retention and evolution of NBS-encoding genes upon whole genome triplication of Brassica rapa

(2014) Ping Wu et al.   GENE

Frequent loss of lineages and deficient duplications accounted for low copy number of disease resistance genes in Cucurbitaceae

(2013) Xiao Lin et al.   BMC GENOMICS

High presence/absence gene variability in defense-related gene clusters of Cucumis melo

(2013) Víctor M González et al.   BMC GENOMICS

Genome-wide analysis of NBS-encoding disease resistance genes in Cucumis sativus and phylogenetic study of NBS-encoding genes in Cucurbitaceae crops

(2013) Hongjian Wan et al.   BMC GENOMICS

Variation of presence/absence genes among Arabidopsis populations

(2012) Shengjun Tan et al.   BMC EVOLUTIONARY BIOLOGY

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff

(2012) Pablo Cingolani et al.   FLY

The genome of melon (Cucumis melo L.)

(2012) J. Garcia-Mas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quality control and preprocessing of metagenomic datasets

(2011) R. Schmieder et al.   BIOINFORMATICS

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

Genome-Wide Comparison of Nucleotide-Binding Site-Leucine-Rich Repeat-Encoding Genes in Arabidopsis

(2011) Y.-L. Guo et al.   PLANT PHYSIOLOGY

Sequencing of 6.7 Mb of the melon genome using a BAC pooling strategy

(2010) Víctor M González et al.   BMC PLANT BIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

The genome of the cucumber, Cucumis sativus L.

(2009) Sanwen Huang et al.   NATURE GENETICS