Comparative genome analysis of pathogenic and non-pathogenic Clavibacter strains reveals adaptations to their lifestyle

Genetic diversity of non-pathogenic Clavibacter strains isolated from tomato seeds

(2013) Joanna Zaluga et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Phylogenetic Analysis and Polyphasic Characterization of Clavibacter michiganensis Strains Isolated from Tomato Seeds Reveal that Nonpathogenic Strains Are Distinct from C. michiganensis subsp. michiganensis

(2012) Marie-Agnès Jacques et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Toxin-Antitoxin Systems in Bacteria and Archaea

(2011) Yoshihiro Yamaguchi et al.   Annual Review of Genetics

Directed networks reveal genomic barriers and DNA repair bypasses to lateral gene transfer among prokaryotes

(2011) O. Popa et al.   GENOME RESEARCH

The Clavibacter michiganensis subsp. michiganensis–Tomato Interactome Reveals the Perception of Pathogen by the Host and Suggests Mechanisms of Infection

(2011) Alon Savidor et al.   JOURNAL OF PROTEOME RESEARCH

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

GyrB sequence analysis and MALDI-TOF MS as identification tools for plant pathogenic Clavibacter

(2011) Joanna Zaluga et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Dynamic Evolution of Pathogenicity Revealed by Sequencing and Comparative Genomics of 19 Pseudomonas syringae Isolates

(2011) David A. Baltrus et al.   PLoS Pathogens

ISsaga is an ensemble of web-based methods for high throughput identification and semi-automatic annotation of insertion sequences in prokaryotic genomes

(2011) Alessandro M Varani et al.   GENOME BIOLOGY

Interdomain Conjugal Transfer of DNA from Bacteria to Archaea

(2010) J. A. Dodsworth et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Sequencing and Genetic Variation of Multidrug Resistance Plasmids in Klebsiella pneumoniae

(2010) Fangqing Zhao et al.   PLoS One

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

(2010) Aaron E. Darling et al.   PLoS One

IslandViewer: an integrated interface for computational identification and visualization of genomic islands

(2009) M. G. I. Langille et al.   BIOINFORMATICS

EDGAR: A software framework for the comparative analysis of prokaryotic genomes

(2009) Jochen Blom et al.   BMC BIOINFORMATICS

Shifting the genomic gold standard for the prokaryotic species definition

(2009) Michael Richter et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes

(2009) Konstantinos Mavromatis et al.   Standards in Genomic Sciences

DNAPlotter: circular and linear interactive genome visualization

(2008) T. Carver et al.   BIOINFORMATICS

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

Genome of the Actinomycete Plant Pathogen Clavibacter michiganensis subsp. sepedonicus Suggests Recent Niche Adaptation

(2008) S. D. Bentley et al.   JOURNAL OF BACTERIOLOGY

The Genome Sequence of the Tomato-Pathogenic Actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 Reveals a Large Island Involved in Pathogenicity

(2008) K.-H. Gartemann et al.   JOURNAL OF BACTERIOLOGY

A family of serine proteases ofClavibacter michiganensissubsp.michiganensis:chpCplays a role in colonization of the host plant tomato

(2008) INES STORK et al.   MOLECULAR PLANT PATHOLOGY

Klebsiella pneumoniae Multiresistance Plasmid pMET1: Similarity with the Yersinia pestis Plasmid pCRY and Integrative Conjugative Elements

(2008) Alfonso J. C. Soler Bistué et al.   PLoS One