Whole genome profiling of spontaneous and chemically induced mutations in Toxoplasma gondii

MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping

(2014) Wan-Ping Lee et al.   PLoS One

Web-based visual analysis for high-throughput genomics

(2013) Jeremy Goecks et al.   BMC GENOMICS

Genetic basis for phenotypic differences between different Toxoplasma gondii type I strains

(2013) Ninghan Yang et al.   BMC GENOMICS

Mutation identification by direct comparison of whole-genome sequencing data from mutant and wild-type individuals using k-mers

(2013) Karl J V Nordström et al.   NATURE BIOTECHNOLOGY

The HU Protein Is Important for Apicoplast Genome Maintenance and Inheritance in Toxoplasma gondii

(2012) Sarah B. Reiff et al.   EUKARYOTIC CELL

Evidence of non-random mutation rates suggests an evolutionary risk management strategy

(2012) Iñigo Martincorena et al.   NATURE

Fast Homozygosity Mapping and Identification of a Zebrafish ENU-Induced Mutation by Whole-Genome Sequencing

(2012) Marianne L. Voz et al.   PLoS One

A DOC2 Protein Identified by Mutational Profiling Is Essential for Apicomplexan Parasite Exocytosis

(2012) A. Farrell et al.   SCIENCE

A Forward Genetic Screen Reveals that Calcium-dependent Protein Kinase 3 Regulates Egress in Toxoplasma

(2012) Erin Garrison et al.   PLoS Pathogens

Base excision repair apurinic/apyrimidinic endonucleases in apicomplexan parasite Toxoplasma gondii

(2011) David O. Onyango et al.   DNA REPAIR

Whole-genome sequencing of a laboratory-evolved yeast strain

(2010) Carlos L Araya et al.   BMC GENOMICS

The Impact of Whole Genome Sequencing on Model System Genetics: Get Ready for the Ride

(2010) O. Hobert   GENETICS

Whole-Genome Profiling of Mutagenesis in Caenorhabditis elegans

(2010) S. Flibotte et al.   GENETICS

Analysis of Multiple Ethyl Methanesulfonate-Mutagenized Caenorhabditis elegans Strains by Whole-Genome Sequencing

(2010) S. Sarin et al.   GENETICS

A Strategy for Direct Mapping and Identification of Mutations by Whole-Genome Sequencing

(2010) Steven Zuryn et al.   GENETICS

Development of a screen to dissect Toxoplasma gondii egress

(2010) Keith P. Eidell et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

Efficient Gene Replacements inToxoplasma gondiiStrains Deficient for Nonhomologous End Joining

(2009) Barbara A. Fox et al.   EUKARYOTIC CELL

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing

(2009) S. Le Crom et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

ENU Mutagenesis, a Way Forward to Understand Gene Function

(2008) Abraham Acevedo-Arozena et al.   Annual Review of Genomics and Human Genetics

Rapid whole-genome mutational profiling using next-generation sequencing technologies

(2008) D. R. Smith et al.   GENOME RESEARCH

Caenorhabditis elegans mutant allele identification by whole-genome sequencing

(2008) Sumeet Sarin et al.   NATURE METHODS

Whole-genome sequencing and variant discovery in C. elegans

(2008) LaDeana W Hillier et al.   NATURE METHODS

Comparing Platforms for C. elegans Mutant Identification Using High-Throughput Whole-Genome Sequencing

(2008) Yufeng Shen et al.   PLoS One

Forward Genetic Analysis of the Apicomplexan Cell Division Cycle in Toxoplasma gondii

(2008) Marc-Jan Gubbels et al.   PLoS Pathogens