Gene promoters show chromosome-specificity and reveal chromosome territories in humans

Eukaryotic genomes may exhibit up to 10 generic classes of gene promoters

(2012) Paul Gagniuc et al.   BMC GENOMICS

A Genetic Approach to the Transcriptional Regulation of Hox Gene Clusters

(2011) Patrick Tschopp et al.   Annual Review of Genetics

Polycomb-Dependent Regulatory Contacts between Distant Hox Loci in Drosophila

(2011) Frédéric Bantignies et al.   CELL

Characteristics of Core Promoter Types with respect to Gene Structure and Expression in Arabidopsis thaliana

(2011) Y. Y. Yamamoto et al.   DNA RESEARCH

Transcription factories in the context of the nuclear and genome organization

(2011) S. V. Razin et al.   NUCLEIC ACIDS RESEARCH

The Dynamic Architecture of Hox Gene Clusters

(2011) D. Noordermeer et al.   SCIENCE

A Dynamical Model Reveals Gene Co-Localizations in Nucleus

(2011) Jing Kang et al.   PLoS Computational Biology

Confining euchromatin/heterochromatin territory: jumonji crosses the line

(2010) H. Tamaru   GENES & DEVELOPMENT

Relationship between nucleosome positioning and DNA methylation

(2010) Ramakrishna K. Chodavarapu et al.   NATURE

DNA zip codes control an ancient mechanism for gene targeting to the nuclear periphery

(2010) Sara Ahmed et al.   NATURE CELL BIOLOGY

Cell type specific chromosome territory organization in the interphase nucleus of normal and cancer cells

(2009) Narasimharao V. Marella et al.   JOURNAL OF CELLULAR PHYSIOLOGY

High DNA melting temperature predicts transcription start site location in human and mouse

(2009) D. G. Dineen et al.   NUCLEIC ACIDS RESEARCH

Nucleosome positioning by genomic excluding-energy barriers

(2009) Pascale Milani et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome

(2009) E. Lieberman-Aiden et al.   SCIENCE

PlantPAN: Plant promoter analysis navigator, for identifying combinatorial cis-regulatory elements with distance constraint in plant gene groups

(2008) Wen-Chi Chang et al.   BMC GENOMICS

A genetic locus targeted to the nuclear periphery in living cells maintains its transcriptional competence

(2008) R. Ileng Kumaran et al.   JOURNAL OF CELL BIOLOGY

Transcriptional repression mediated by repositioning of genes to the nuclear lamina

(2008) K. L. Reddy et al.   NATURE

Recruitment to the Nuclear Periphery Can Alter Expression of Genes in Human Cells

(2008) Lee E. Finlan et al.   PLoS Genetics