De novo transcriptome sequencing of axolotl blastema for identification of differentially expressed genes during limb regeneration

Gene expression patterns specific to the regenerating limb of the Mexican axolotl

(2012) James R. Monaghan et al.   Biology Open

Identification of differentially expressed thyroid hormone responsive genes from the brain of the Mexican Axolotl (Ambystoma mexicanum)

(2011) P. Huggins et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY C-TOXICOLOGY & PHARMACOLOGY

Blastema induction in aneurogenic state and Prrx-1 regulation by MMPs and FGFs in Ambystoma mexicanum limb regeneration

(2011) Akira Satoh et al.   DEVELOPMENTAL BIOLOGY

Gene expression profile of the regeneration epithelium during axolotl limb regeneration

(2011) Leah J. Campbell et al.   DEVELOPMENTAL DYNAMICS

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery

(2010) Thomas L Parchman et al.   BMC GENOMICS

Regulation of dermal fibroblast dedifferentiation and redifferentiation during wound healing and limb regeneration in the Axolotl

(2010) Akira Satoh et al.   DEVELOPMENT GROWTH & DIFFERENTIATION

Ex vivo generation of a functional and regenerative wound epithelium from axolotl (Ambystoma mexicanum) skin

(2010) Donald R. Ferris et al.   DEVELOPMENT GROWTH & DIFFERENTIATION

De novo assembly and analysis of RNA-seq data

(2010) Gordon Robertson et al.   NATURE METHODS

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS

Microarray and cDNA sequence analysis of transcription during nerve-dependent limb regeneration

(2009) James R Monaghan et al.   BMC BIOLOGY

De novo assembly of human genomes with massively parallel short read sequencing

(2009) R. Li et al.   GENOME RESEARCH

Next-Generation DNA Sequencing Methods

(2008) Elaine R. Mardis   Annual Review of Genomics and Human Genetics

Neurotrophic regulation of epidermal dedifferentiation during wound healing and limb regeneration in the axolotl (Ambystoma mexicanum)

(2008) A. Satoh et al.   DEVELOPMENTAL BIOLOGY

The new paradigm of flow cell sequencing

(2008) R. A. Holt et al.   GENOME RESEARCH

Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing

(2008) J. CRISTOBAL VERA et al.   MOLECULAR ECOLOGY

Next-generation DNA sequencing

(2008) Jay Shendure et al.   NATURE BIOTECHNOLOGY