Spatial compartmentalization at the nuclear periphery characterized by genome-wide mapping

DNA Sequence-Dependent Compartmentalization and Silencing of Chromatin at the Nuclear Lamina

(2012) Joseph M. Zullo et al.   CELL

Polycomb: a paradigm for genome organization from one to three dimensions

(2012) Anna Delest et al.   CURRENT OPINION IN CELL BIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Sub-nuclear compartmentalization of core promoter factors and target genes

(2011) Jie Yao et al.   CELL CYCLE

Nuclear organization: taking a position on gene expression

(2011) Pamela K Geyer et al.   CURRENT OPINION IN CELL BIOLOGY

Locking the genome: nuclear organization and cell fate

(2011) Peter Meister et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

The Msx1 Homeoprotein Recruits Polycomb to the Nuclear Periphery during Development

(2011) Jingqiang Wang et al.   DEVELOPMENTAL CELL

Redirecting Traffic in the Nucleus

(2011) Kulwant Singh et al.   DEVELOPMENTAL CELL

Subnuclear segregation of genes and core promoter factors in myogenesis

(2011) Jie Yao et al.   GENES & DEVELOPMENT

Genome-wide remodeling of the epigenetic landscape during myogenic differentiation

(2011) P. Asp et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Compartmentalization of the nucleus

(2011) Lauren Meldi et al.   TRENDS IN CELL BIOLOGY

A User's Guide to the Encyclopedia of DNA Elements (ENCODE)

(2011)   PLOS BIOLOGY

The uniqueome: a mappability resource for short-tag sequencing

(2010) Ryan Koehler et al.   BIOINFORMATICS

The role of Drosophila Lamin C in muscle function and gene expression

(2010) G. Dialynas et al.   DEVELOPMENT

Molecular Maps of the Reorganization of Genome-Nuclear Lamina Interactions during Differentiation

(2010) Daan Peric-Hupkes et al.   MOLECULAR CELL

Histone H4K20/H3K9 demethylase PHF8 regulates zebrafish brain and craniofacial development

(2010) Hank H. Qi et al.   NATURE

Cooperation between myogenic regulatory factors and SIX family transcription factors is important for myoblast differentiation

(2010) Yubing Liu et al.   NUCLEIC ACIDS RESEARCH

A clustering approach for identification of enriched domains from histone modification ChIP-Seq data

(2009) Chongzhi Zang et al.   BIOINFORMATICS

Sequencing technologies — the next generation

(2009) Michael L. Metzker   NATURE REVIEWS GENETICS

A progeria mutation reveals functions for lamin A in nuclear assembly, architecture, and chromosome organization

(2009) P. Taimen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome

(2009) E. Lieberman-Aiden et al.   SCIENCE

The Meaning of Gene Positioning

(2008) Takumi Takizawa et al.   CELL

Nuclear lamins: major factors in the structural organization and function of the nucleus and chromatin

(2008) T. Dechat et al.   GENES & DEVELOPMENT

A genetic locus targeted to the nuclear periphery in living cells maintains its transcriptional competence

(2008) R. Ileng Kumaran et al.   JOURNAL OF CELL BIOLOGY

Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions

(2008) Lars Guelen et al.   NATURE

Transcriptional repression mediated by repositioning of genes to the nuclear lamina

(2008) K. L. Reddy et al.   NATURE

Recruitment to the Nuclear Periphery Can Alter Expression of Genes in Human Cells

(2008) Lee E. Finlan et al.   PLoS Genetics