DNMT1 and AIM1 Imprinting in human placenta revealed through a genome-wide screen for allele-specific DNA methylation

Detection of allele-specific methylation through a generalized heterogeneous epigenome model

(2012) Q. Peng et al.   BIOINFORMATICS

Base-Resolution Analyses of Sequence and Parent-of-Origin Dependent DNA Methylation in the Mouse Genome

(2012) Wei Xie et al.   CELL

Protection against De Novo Methylation Is Instrumental in Maintaining Parent-of-Origin Methylation Inherited from the Gametes

(2012) Charlotte Proudhon et al.   MOLECULAR CELL

A survey of tissue-specific genomic imprinting in mammals

(2012) Adam R. Prickett et al.   MOLECULAR GENETICS AND GENOMICS

The ever growing complexity of placental epigenetics – Role in adverse pregnancy outcomes and fetal programming

(2012) B. Novakovic et al.   PLACENTA

Genomic landscape of human allele-specific DNA methylation

(2012) F. Fang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The placental imprintome and imprinted gene function in the trophoblast glycogen cell lineage

(2012) Louis Lefebvre   REPRODUCTIVE BIOMEDICINE ONLINE

Critical Evaluation of Imprinted Gene Expression by RNA–Seq: A New Perspective

(2012) Brian DeVeale et al.   PLoS Genetics

Extra-embryonic-specific imprinted expression is restricted to defined lineages in the post-implantation embryo

(2011) Quanah J. Hudson et al.   DEVELOPMENTAL BIOLOGY

Developmental regulation of somatic imprints

(2011) Rosalind M. John et al.   DIFFERENTIATION

A Survey for Novel Imprinted Genes in the Mouse Placenta by mRNA-seq

(2011) Xu Wang et al.   GENETICS

A novel approach identifies new differentially methylated regions (DMRs) associated with imprinted genes

(2011) S. Choufani et al.   GENOME RESEARCH

Methylation screening of reciprocal genome-wide UPDs identifies novel human-specific imprinted genes†

(2011) Kazuhiko Nakabayashi et al.   HUMAN MOLECULAR GENETICS

CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing

(2011) Sanjeev Shukla et al.   NATURE

Human imprinted retrogenes exhibit non-canonical imprint chromatin signatures and reside in non-imprinted host genes

(2011) David Monk et al.   NUCLEIC ACIDS RESEARCH

Genome-wide mapping of imprinted differentially methylated regions by DNA methylation profiling of human placentas from triploidies

(2011) Ryan KC Yuen et al.   Epigenetics & Chromatin

Genome-wide assessment of imprinted expression in human cells

(2011) Lisanne Morcos et al.   GENOME BIOLOGY

Extreme Methylation Values of Imprinted Genes in Human Abortions and Stillbirths

(2010) Galyna Pliushch et al.   AMERICAN JOURNAL OF PATHOLOGY

A sensitive functional assay reveals frequent loss of genomic imprinting in human placenta

(2010) Luca Lambertini et al.   Epigenetics

The primate-specific microRNA gene cluster (C19MC) is imprinted in the placenta

(2010) M. Noguer-Dance et al.   HUMAN MOLECULAR GENETICS

Replication timing-related and gene body-specific methylation of active human genes

(2010) Dvir Aran et al.   HUMAN MOLECULAR GENETICS

DNA Methylation-mediated Down-regulation of DNA Methyltransferase-1 (DNMT1) Is Coincident with, but Not Essential for, Global Hypomethylation in Human Placenta

(2010) Boris Novakovic et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Methylation Allelic Polymorphism (MAP) in Chorionic Gonadotropin β5 (CGB5) and Its Association with Pregnancy Success

(2010) Liis Uusküla et al.   JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM

Successful Computational Prediction of Novel Imprinted Genes from Epigenomic Features

(2010) C. M. Brideau et al.   MOLECULAR AND CELLULAR BIOLOGY

DNMT1 maintains progenitor function in self-renewing somatic tissue

(2010) George L. Sen et al.   NATURE

High-Resolution Analysis of Parent-of-Origin Allelic Expression in the Mouse Brain

(2010) C. Gregg et al.   SCIENCE

Sex-Specific Parent-of-Origin Allelic Expression in the Mouse Brain

(2010) C. Gregg et al.   SCIENCE

The implications of heterogeneous DNA methylation for the accurate quantification of methylation

(2010) Thomas Mikeska et al.   Epigenomics

The Importance of Imprinting in the Human Placenta

(2010) Jennifer M. Frost et al.   PLoS Genetics

Genomic analyses reveal global functional alterations that promote tumor growth and novel tumor suppressor genes in natural killer-cell malignancies

(2009) J Iqbal et al.   LEUKEMIA

Unearthing the Roles of Imprinted Genes in the Placenta

(2009) F.F. Bressan et al.   PLACENTA

Human Placental-Specific Epipolymorphism and its Association with Adverse Pregnancy Outcomes

(2009) Ryan K. C. Yuen et al.   PLoS One

Identification of a region of the DNMT1 methyltransferase that regulates the maintenance of genomic imprints

(2009) E. Borowczyk et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Human Retinoblastoma Gene Is Imprinted

(2009) Deniz Kanber et al.   PLoS Genetics

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Systematic Search for Placental DNA-Methylation Markers on Chromosome 21: Toward a Maternal Plasma-Based Epigenetic Test for Fetal Trisomy 21

(2008) S. S.C. Chim et al.   CLINICAL CHEMISTRY

Global Survey of Genomic Imprinting by Transcriptome Sequencing

(2008) Tomas Babak et al.   CURRENT BIOLOGY

Overlapping euchromatin/heterochromatin- associated marks are enriched in imprinted gene regions and predict allele-specific modification

(2008) B. Wen et al.   GENOME RESEARCH

Comparative analysis of human chromosome 7q21 and mouse proximal chromosome 6 reveals a placental-specific imprinted gene, TFPI2/Tfpi2, which requires EHMT2 and EED for allelic-silencing

(2008) D. Monk et al.   GENOME RESEARCH

Exploring the Limits of Sequence and Structure in a Variant βγ-Crystallin Domain of the Protein Absent in Melanoma-1 (AIM1)

(2008) Penmatsa Aravind et al.   JOURNAL OF MOLECULAR BIOLOGY

A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis

(2008) Thomas A Down et al.   NATURE BIOTECHNOLOGY

Deletions and epimutations affecting the human 14q32.2 imprinted region in individuals with paternal and maternal upd(14)-like phenotypes

(2008) Masayo Kagami et al.   NATURE GENETICS

Maintenance of genomic methylation patterns during preimplantation development requires the somatic form of DNA methyltransferase 1

(2007) Yukiko Kurihara et al.   DEVELOPMENTAL BIOLOGY