Identification of gene fusions from human lung cancer mass spectrometry data

Correction to Protein Identification Using Customized Protein Sequence Databases Derived from RNA-Seq Data

(2012) Xiaojing Wang et al.   JOURNAL OF PROTEOME RESEARCH

Addressing Statistical Biases in Nucleotide-Derived Protein Databases for Proteogenomic Search Strategies

(2012) Paul Blakeley et al.   JOURNAL OF PROTEOME RESEARCH

In-depth Proteomic Analysis of Nonsmall Cell Lung Cancer to Discover Molecular Targets and Candidate Biomarkers

(2012) Takefumi Kikuchi et al.   MOLECULAR & CELLULAR PROTEOMICS

The discovery of novel protein-coding features in mouse genome based on mass spectrometry data

(2011) Xiao-Bin Xing et al.   GENOMICS

Estimates of worldwide burden of cancer in 2008: GLOBOCAN 2008

(2010) Jacques Ferlay et al.   INTERNATIONAL JOURNAL OF CANCER

pNovo:De novoPeptide Sequencing and Identification Using HCD Spectra

(2010) Hao Chi et al.   JOURNAL OF PROTEOME RESEARCH

Proteogenomics to discover the full coding content of genomes: A computational perspective

(2010) Natalie Castellana et al.   Journal of Proteomics

The mutation spectrum revealed by paired genome sequences from a lung cancer patient

(2010) William Lee et al.   NATURE

COSMIC: mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer

(2010) S. A. Forbes et al.   NUCLEIC ACIDS RESEARCH

Distribution ofNPM1-ALKandX-ALKfusion transcripts in paediatric anaplastic large cell lymphoma: a molecular-histological correlation

(2009) Christine Damm-Welk et al.   BRITISH JOURNAL OF HAEMATOLOGY

The cancer genome

(2009) Michael R. Stratton et al.   NATURE

ChimerDB 2.0—a knowledgebase for fusion genes updated

(2009) Pora Kim et al.   NUCLEIC ACIDS RESEARCH

ProteoWizard: open source software for rapid proteomics tools development

(2008) Darren Kessner et al.   BIOINFORMATICS

Comparative proteogenomics: Combining mass spectrometry and comparative genomics to analyze multiple genomes

(2008) N. Gupta et al.   GENOME RESEARCH

Algorithm for Identification of Fusion Proteins via Mass Spectrometry

(2008) Julio Ng et al.   JOURNAL OF PROTEOME RESEARCH

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY

Discovery and revision of Arabidopsis genes by proteogenomics

(2008) N. E. Castellana et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA