Comparative genomics of the classical Bordetella subspecies: the evolution and exchange of virulence-associated diversity amongst closely related pathogens

A Type VI Secretion System Encoding Locus Is Required for Bordetella bronchiseptica Immunomodulation and Persistence In Vivo

(2012) Laura S. Weyrich et al.   PLoS One

Interplay of recombination and selection in the genomes of Chlamydia trachomatis

(2011) Sandeep J Joseph et al.   Biology Direct

Complete Genome Sequence of Bordetella pertussis CS, a Chinese Pertussis Vaccine Strain

(2011) S. Zhang et al.   JOURNAL OF BACTERIOLOGY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Comparative genomics of prevaccination and modern Bordetella pertussis strains

(2010) Marieke J Bart et al.   BMC GENOMICS

O-antigen diversity and lateral transfer of the wbe region among Vibrio splendidus isolates

(2010) Hans Wildschutte et al.   ENVIRONMENTAL MICROBIOLOGY

Comparison of 61 Sequenced Escherichia coli Genomes

(2010) Oksana Lukjancenko et al.   MICROBIAL ECOLOGY

Insight into Evolution of Bordetella pertussis from Comparative Genomic Analysis: Evidence of Vaccine-Driven Selection

(2010) Sophie Octavia et al.   MOLECULAR BIOLOGY AND EVOLUTION

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

(2010) Aaron E. Darling et al.   PLoS One

Evolution of MRSA During Hospital Transmission and Intercontinental Spread

(2010) S. R. Harris et al.   SCIENCE

inGAP: an integrated next-generation genome analysis pipeline

(2009) Ji Qi et al.   BIOINFORMATICS

Microbial comparative pan-genomics using binomial mixture models

(2009) Lars Snipen et al.   BMC GENOMICS

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

Evidence for Horizontal Gene Transfer of Two Antigenically Distinct O Antigens in Bordetella bronchiseptica

(2009) A. M. Buboltz et al.   INFECTION AND IMMUNITY

Role of the Type III Secretion System in a Hypervirulent Lineage of Bordetella bronchiseptica

(2009) A. M. Buboltz et al.   INFECTION AND IMMUNITY

Pertussis Toxin Signals through the TCR to Initiate Cross-Desensitization of the Chemokine Receptor CXCR4

(2009) O. D. Schneider et al.   JOURNAL OF IMMUNOLOGY

Genome Project Standards in a New Era of Sequencing

(2009) P. S. G. Chain et al.   SCIENCE

Role of Intraspecies Recombination in the Spread of Pathogenicity Islands within the Escherichia coli Species

(2009) Sören Schubert et al.   PLoS Pathogens

De Novo Assembly and Genomic Structural Variation Analysis with Genome Sequencer FLX 3K Long-Tag Paired End Reads

(2008) Thomas Jarvie et al.   BIOTECHNIQUES

The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae

(2008) Roy Gross et al.   BMC GENOMICS

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

Comparative genomics: the bacterial pan-genome

(2008) Hervé Tettelin et al.   CURRENT OPINION IN MICROBIOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

Replacement of Adenylate Cyclase Toxin in a Lineage of Bordetella bronchiseptica

(2008) A. M. Buboltz et al.   JOURNAL OF BACTERIOLOGY

Genomic comparison of the O-antigen biosynthesis gene clusters of Escherichia coli O55 strains belonging to three distinct lineages

(2008) A. Iguchi et al.   MICROBIOLOGY-SGM