Transcriptome profiling of the demosponge Amphimedon queenslandica reveals genome-wide events that accompany major life cycle transitions

Blue-light-receptive cryptochrome is expressed in a sponge eye lacking neurons and opsin

(2012) A. S. Rivera et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

The biology of coral metamorphosis: Molecular responses of larvae to inducers of settlement and metamorphosis

(2011) L.C. Grasso et al.   DEVELOPMENTAL BIOLOGY

The Ecoresponsive Genome of Daphnia pulex

(2011) J. K. Colbourne et al.   SCIENCE

Structure and expression of conserved Wnt pathway components in the demosponge Amphimedon queenslandica

(2010) Maja Adamska et al.   EVOLUTION & DEVELOPMENT

Origin of animal epithelia: insights from the sponge genome

(2010) Bryony Fahey et al.   EVOLUTION & DEVELOPMENT

A cryptochrome-based photosensory system in the siliceous sponge Suberites domuncula (Demospongiae)

(2010) Werner E. G. Müller et al.   FEBS Journal

Demosponge EST Sequencing Reveals a Complex Genetic Toolkit of the Simplest Metazoans

(2010) M. Harcet et al.   MOLECULAR BIOLOGY AND EVOLUTION

The dynamic genome of Hydra

(2010) Jarrod A. Chapman et al.   NATURE

The Amphimedon queenslandica genome and the evolution of animal complexity

(2010) Mansi Srivastava et al.   NATURE

RNA-Seq analysis to capture the transcriptome landscape of a single cell

(2010) Fuchou Tang et al.   Nature Protocols

The initiation of metamorphosis as an ancient polyphenic trait and its role in metazoan life-cycle evolution

(2010) S. M. Degnan et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Freshwater Sponges Have Functional, Sealing Epithelia with High Transepithelial Resistance and Negative Transepithelial Potential

(2010) Emily D. M. Adams et al.   PLoS One

Most “Dark Matter” Transcripts Are Associated With Known Genes

(2010) Harm van Bakel et al.   PLOS BIOLOGY

Origin and evolution of the Notch signalling pathway: an overview from eukaryotic genomes

(2009) Eve Gazave et al.   BMC EVOLUTIONARY BIOLOGY

Wnt Signaling and the Polarity of the Primary Body Axis

(2009) Christian P. Petersen et al.   CELL

Luciferase a light source for the silica-based optical waveguides (spicules) in the demosponge Suberites domuncula

(2009) W. E. G. Müller et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Epithelia and integration in sponges

(2009) S. P. Leys et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Widespread transcriptional changes pre-empt the critical pelagic-benthic transition in the vetigastropodHaliotis asinina

(2009) ELIZABETH A. WILLIAMS et al.   MOLECULAR ECOLOGY

WNT/β-Catenin Signalling and Epithelial Patterning in the Homoscleromorph Sponge Oscarella

(2009) Pascal Lapébie et al.   PLoS One

Microarray analysis identifies candidate genes for key roles in coral development

(2008) Lauretta C Grasso et al.   BMC GENOMICS

Sponge Genes Provide New Insight into the Evolutionary Origin of the Neurogenic Circuit

(2008) Gemma S. Richards et al.   CURRENT BIOLOGY

Partitioning of genetically distinct cell populations in chimeric juveniles of the sponge Amphimedon queenslandica

(2008) Marie Gauthier et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Genesis and Expansion of Metazoan Transcription Factor Gene Classes

(2008) Claire Larroux et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Trichoplax genome and the nature of placozoans

(2008) Mansi Srivastava et al.   NATURE

Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals

(2008) Andrew Grimson et al.   NATURE

Stem cell transcriptome profiling via massive-scale mRNA sequencing

(2008) Nicole Cloonan et al.   NATURE METHODS

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

Analyzing real-time PCR data by the comparative CT method

(2008) Thomas D Schmittgen et al.   Nature Protocols

Adhesion-GPCRs: emerging roles for novel receptors

(2008) Simon Yona et al.   TRENDS IN BIOCHEMICAL SCIENCES