The transcriptional landscape of the deep-sea bacterium Photobacterium profundum in both a toxR mutant and its parental strain

Artemis: an integrated platform for visualization and analysis of high-throughput sequence-based experimental data

(2011) T. Carver et al.   BIOINFORMATICS

Rewiring two-component signal transduction with small RNAs

(2011) Yvonne Göpel et al.   CURRENT OPINION IN MICROBIOLOGY

A high resolution map of a cyanobacterial transcriptome

(2011) Vikram Vijayan et al.   GENOME BIOLOGY

Temperature-dependent global gene expression in the Antarctic archaeon Methanococcoides burtonii

(2010) S. Campanaro et al.   ENVIRONMENTAL MICROBIOLOGY

The primary transcriptome of the major human pathogen Helicobacter pylori

(2010) Cynthia M. Sharma et al.   NATURE

Genome-wide measurement of RNA secondary structure in yeast

(2010) Michael Kertesz et al.   NATURE

PASS: a program to align short sequences

(2009) D. Campagna et al.   BIOINFORMATICS

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

Regulatory RNAs in Bacteria

(2009) Lauren S. Waters et al.   CELL

A single-base resolution map of an archaeal transcriptome

(2009) O. Wurtzel et al.   GENOME RESEARCH

The Listeria transcriptional landscape from saprophytism to virulence

(2009) Alejandro Toledo-Arana et al.   NATURE

Differential replication dynamics for large and small Vibrio chromosomes affect gene dosage, expression and location

(2008) Rikard Dryselius et al.   BMC GENOMICS

The relative value of operon predictions

(2008) R. W. W. Brouwer et al.   BRIEFINGS IN BIOINFORMATICS

Ferritin is used for iron storage in bloom-forming marine pennate diatoms

(2008) Adrian Marchetti et al.   NATURE