Reducing confounding and suppression effects in TCGA data: an integrated analysis of chemotherapy response in ovarian cancer

Frequent genetic abnormalities of the PI3K/AKT pathway in primary ovarian cancer predict patient outcome

(2011) Jia Huang et al.   GENES CHROMOSOMES & CANCER

Integrated genomic analyses of ovarian carcinoma

(2011) D. Bell et al.   NATURE

Semi-supervised recursively partitioned mixture models for identifying cancer subtypes

(2010) Devin C. Koestler et al.   BIOINFORMATICS

Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis

(2010) Pan Du et al.   BMC BIOINFORMATICS

Tackling the widespread and critical impact of batch effects in high-throughput data

(2010) Jeffrey T. Leek et al.   NATURE REVIEWS GENETICS

DNA Methylation Profiles of Ovarian Epithelial Carcinoma Tumors and Cell Lines

(2010) Sahar Houshdaran et al.   PLoS One

Integrated analysis of DNA methylation and gene expression reveals specific signaling pathways associated with platinum resistance in ovarian cancer

(2009) Meng Li et al.   BMC Medical Genomics

Integrated Genome-Wide DNA Copy Number and Expression Analysis Identifies Distinct Mechanisms of Primary Chemoresistance in Ovarian Carcinomas

(2009) D. Etemadmoghadam et al.   CLINICAL CANCER RESEARCH

Carboplatin-induced gene expression changes in vitroare prognostic of survival in epithelial ovarian cancer

(2008) Panagiotis A Konstantinopoulos et al.   BMC Medical Genomics