Transcriptome sequencing and microarray development for the Manila clam, Ruditapes philippinarum: genomic tools for environmental monitoring

Development of an oligo DNA microarray for the European sea bass and its application to expression profiling of jaw deformity

(2010) Serena Ferraresso et al.   BMC GENOMICS

High-throughput sequencing and analysis of the gill tissue transcriptome from the deep-sea hydrothermal vent mussel Bathymodiolus azoricus

(2010) Raul Bettencourt et al.   BMC GENOMICS

Ragulator-Rag Complex Targets mTORC1 to the Lysosomal Surface and Is Necessary for Its Activation by Amino Acids

(2010) Yasemin Sancak et al.   CELL

Cloning, characterization and tissue distribution of a pi-class glutathione S-transferase from clam (Venerupis philippinarum): Response to benzo[α]pyrene exposure

(2010) Chaoqun Xu et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY C-TOXICOLOGY & PHARMACOLOGY

RNA Dust: Where are the Genes?

(2010) P. Carninci   DNA RESEARCH

Lessons from a transplantation of zebra mussels into a small urban river: An integrated ecotoxicological assessment

(2010) A. Bourgeault et al.   ENVIRONMENTAL TOXICOLOGY

Transcribed dark matter: meaning or myth?

(2010) C. P. Ponting et al.   HUMAN MOLECULAR GENETICS

Biomarker responses and contamination levels in the clam Ruditapes philippinarum for biomonitoring the Lagoon of Venice (Italy)

(2010) Valerio Matozzo et al.   JOURNAL OF ENVIRONMENTAL MONITORING

Involvement of autophagy via mammalian target of rapamycin (mTOR) inhibition in tributyltin-induced neuronal cell death

(2010) Yusuke Nakatsu et al.   JOURNAL OF TOXICOLOGICAL SCIENCES

Pyrosequencing of Mytilus galloprovincialis cDNAs: Tissue-Specific Expression Patterns

(2010) John A. Craft et al.   PLoS One

Whole genome transcriptome analysis

(2010) Alistair R.R. Forrest et al.   RNA Biology

Hepatic gene expression in flounder chronically exposed to multiply polluted estuarine sediment: Absence of classical exposure ‘biomarker’ signals and induction of inflammatory, innate immune and apoptotic pathways

(2009) Michael J. Leaver et al.   AQUATIC TOXICOLOGY

Gene expression profile of grass shrimp Palaemonetes pugio exposed to chronic hypoxia

(2009) Tiandao Li et al.   Comparative Biochemistry and Physiology D-Genomics & Proteomics

Naturally occurring antisense RNA: function and mechanisms of action

(2009) Andreas Werner et al.   CURRENT OPINION IN NEPHROLOGY AND HYPERTENSION

Overview of ecotoxicological studies performed in the Venice Lagoon (Italy)

(2009) C. Losso et al.   ENVIRONMENT INTERNATIONAL

GENE EXPRESSION PROFILING IN ATLANTIC COD (GADUS MORHUA L.) FROM TWO CONTAMINATED SITES USING A CUSTOM-MADE cDNA MICROARRAY

(2009) Kai K. Lie et al.   ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY

In vivoRNA interference in oyster -vasasilencing inhibits germ cell development

(2009) Caroline Fabioux et al.   FEBS Journal

Design and Performance of a Turbot (Scophthalmus maximus) Oligo-microarray Based on ESTs from Immune Tissues

(2009) Adrián Millán et al.   MARINE BIOTECHNOLOGY

Microarray-Based Identification of Gonad Transcripts Differentially Expressed Between Lines of Pacific Oyster Selected to Be Resistant or Susceptible to Summer Mortality

(2009) Elodie Fleury et al.   MARINE BIOTECHNOLOGY

Hepatic transcriptomic profiles of European flounder (Platichthys flesus) from field sites and computational approaches to predict site from stress gene responses following exposure to model toxicants

(2008) F FALCIANI et al.   AQUATIC TOXICOLOGY

Proteomic identification, cDNA cloning and enzymatic activity of glutathione S-transferases from the generalist marine gastropod, Cyphoma gibbosum

(2008) Kristen E. Whalen et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

Development and validation of a gene expression oligo microarray for the gilthead sea bream (Sparus aurata)

(2008) Serena Ferraresso et al.   BMC GENOMICS

Altered gene expression in the brain and liver of female fathead minnows Pimephales promelas Rafinesque exposed to fadrozole

(2008) D. L. Villeneuve et al.   JOURNAL OF FISH BIOLOGY

Development of a 37 k high-density oligonucleotide microarray: a new tool for functional genome research in rainbow trout

(2008) M. Salem et al.   JOURNAL OF FISH BIOLOGY

Identification of development and tissue-specific gene expression in the fathead minnow Pimephales promelas, Rafinesque using computational and DNA microarray methods

(2008) M. D. Kane et al.   JOURNAL OF FISH BIOLOGY

Use of a 15 k gene microarray to determine gene expression changes in response to acute and chronic methylmercury exposure in the fathead minnow Pimephales promelas Rafinesque

(2008) R. Klaper et al.   JOURNAL OF FISH BIOLOGY

Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing

(2008) J. CRISTOBAL VERA et al.   MOLECULAR ECOLOGY

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH