De novo sequence assembly of Albugo candida reveals a small genome relative to other biotrophic oomycetes

Analyses of genome architecture and gene expression reveal novel candidate virulence factors in the secretome of Phytophthora infestans

(2010) Sylvain Raffaele et al.   BMC GENOMICS

External Lipid PI3P Mediates Entry of Eukaryotic Pathogen Effectors into Plant and Animal Host Cells

(2010) Shiv D. Kale et al.   CELL

Oomycete–plant coevolution: recent advances and future prospects

(2010) Marco Thines et al.   CURRENT OPINION IN PLANT BIOLOGY

The twin arginine protein transport pathway exports multiple virulence proteins in the plant pathogen Streptomyces scabies

(2010) Madhumita V. Joshi et al.   MOLECULAR MICROBIOLOGY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Signatures of Adaptation to Obligate Biotrophy in the Hyaloperonospora arabidopsidis Genome

(2010) L. Baxter et al.   SCIENCE

Genome Expansion and Gene Loss in Powdery Mildew Fungi Reveal Tradeoffs in Extreme Parasitism

(2010) P. D. Spanu et al.   SCIENCE

Molecular mapping reveals two independent loci conferring resistance to Albugo candida in the east European germplasm of oilseed mustard Brassica juncea

(2010) Priya Panjabi-Massand et al.   THEORETICAL AND APPLIED GENETICS

Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire

(2010) C André Lévesque et al.   GENOME BIOLOGY

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

WRR4,a broad-spectrum TIR-NB-LRR gene fromArabidopsis thalianathat confers white rust resistance in transgenic oilseed brassica crops

(2009) MOHAMMAD HOSSEIN BORHAN et al.   MOLECULAR PLANT PATHOLOGY

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans

(2009) Brian J. Haas et al.   NATURE

A new species of Albugo parasitic to Arabidopsis thaliana reveals new evolutionary patterns in white blister rusts (Albuginaceae)

(2009) M. Thines et al.   PERSOONIA

Evidence for the importance of enzymatic digestion of epidermal walls during subepidermal sporulation and pustule opening in white blister rusts (Albuginaceae)

(2009) Annerose Heller et al.  

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Homologous recombination-mediated cloning and manipulation of genomic DNA regions using Gateway and recombineering systems

(2008) Kevin L Rozwadowski et al.   BMC BIOTECHNOLOGY

Analysis of the Pythium ultimum transcriptome using Sanger and Pyrosequencing approaches

(2008) Foo Cheung et al.   BMC GENOMICS

Oomycete RXLR effectors: delivery, functional redundancy and durable disease resistance

(2008) Paul RJ Birch et al.   CURRENT OPINION IN PLANT BIOLOGY

Basic Compatibility ofAlbugo candidainArabidopsis thalianaandBrassica junceaCauses Broad-Spectrum Suppression of Innate Immunity

(2008) A. J. Cooper et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

WRR4 Encodes a TIR-NB-LRR Protein That Confers Broad-Spectrum White Rust Resistance in Arabidopsis thaliana to Four Physiological Races of Albugo candida

(2008) M. Hossein Borhan et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Conserved C-Terminal Motifs Required for Avirulence and Suppression of Cell Death by Phytophthora sojae effector Avr1b

(2008) D. Dou et al.   PLANT CELL

Transcriptome of Aphanomyces euteiches: New Oomycete Putative Pathogenicity Factors and Metabolic Pathways

(2008) Elodie Gaulin et al.   PLoS One

Effector Genomics Accelerates Discovery and Functional Profiling of Potato Disease Resistance and Phytophthora Infestans Avirulence Genes

(2008) Vivianne G. A. A. Vleeshouwers et al.   PLoS One

Whole-genome analysis reveals molecular innovations and evolutionary transitions in chromalveolate species

(2008) C. Martens et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RXLR effector reservoir in two Phytophthora species is dominated by a single rapidly evolving superfamily with more than 700 members

(2008) R. H. Y. Jiang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The genomic architecture of disease resistance in lettuce

(2008) Leah K. McHale et al.   THEORETICAL AND APPLIED GENETICS

Evidence for uncharted biodiversity in the Albugo candida complex, with the description of a new species

(2008) Young-Joon Choi et al.  

Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

(2008) Brian J Haas et al.   GENOME BIOLOGY