Reassortment patterns of avian influenza virus internal segments among different subtypes

Automated analysis of phylogenetic clusters

(2013) Manon Ragonnet-Cronin et al.   BMC BIOINFORMATICS

Complex Reassortment of Multiple Subtypes of Avian Influenza Viruses in Domestic Ducks at the Dongting Lake Region of China

(2013) G. Deng et al.   JOURNAL OF VIROLOGY

A counting renaissance: combining stochastic mapping and empirical Bayes to quickly detect amino acid sites under positive selection

(2012) Philippe Lemey et al.   BIOINFORMATICS

Prospective of Genomics in Revealing Transmission, Reassortment and Evolution of Wildlife-Borne Avian Influenza A (H5N1) Viruses

(2012) Fumin Lei et al.   CURRENT GENOMICS

Establishment and Lineage Replacement of H6 Influenza Viruses in Domestic Ducks in Southern China

(2012) K. Huang et al.   JOURNAL OF VIROLOGY

Phylogenetic Diversity and Genotypical Complexity of H9N2 Influenza A Viruses Revealed by Genomic Sequence Analysis

(2011) Guoying Dong et al.   PLoS One

Toward a quantitative understanding of viral phylogeography

(2011) Nuno Rodrigues Faria et al.   Current Opinion in Virology

Influenza Virus Evolution, Host Adaptation, and Pandemic Formation

(2010) Jeffery K. Taubenberger et al.   Cell Host & Microbe

Establishment of an H6N2 Influenza Virus Lineage in Domestic Ducks in Southern China

(2010) K. Huang et al.   JOURNAL OF VIROLOGY

Phylogeography Takes a Relaxed Random Walk in Continuous Space and Time

(2010) P. Lemey et al.   MOLECULAR BIOLOGY AND EVOLUTION

Ecology, Epidemiology and Human Health Implications of Avian Influenza Viruses: Why do We Need to Share Genetic Data?

(2010) I. Capua et al.   Zoonoses and Public Health

Learning to Count: Robust Estimates for Labeled Distances between Molecular Sequences

(2009) J. D. O'Brien et al.   MOLECULAR BIOLOGY AND EVOLUTION

Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic

(2009) Gavin J. D. Smith et al.   NATURE

Gene flow and competitive exclusion of avian influenza A virus in natural reservoir hosts

(2009) Justin Bahl et al.   VIROLOGY

Bayesian Phylogeography Finds Its Roots

(2009) Philippe Lemey et al.   PLoS Computational Biology

The Role of Genomics in Tracking the Evolution of Influenza A Virus

(2009) Alice Carolyn McHardy et al.   PLoS Pathogens

The genomic and epidemiological dynamics of human influenza A virus

(2008) Andrew Rambaut et al.   NATURE

The Evolutionary Genetics and Emergence of Avian Influenza Viruses in Wild Birds

(2008) Vivien G. Dugan et al.   PLoS Pathogens