Potential pitfalls of modelling ribosomal RNA data in phylogenetic tree reconstruction: Evidence from case studies in the Metazoa

Including RNA secondary structures improves accuracy and robustness in reconstruction of phylogenetic trees

(2010) Alexander Keller et al.   Biology Direct

Accelerated Evolutionary Rate of Housekeeping Genes in Tunicates

(2010) Georgia Tsagkogeorga et al.   JOURNAL OF MOLECULAR EVOLUTION

Can comprehensive background knowledge be incorporated into substitution models to improve phylogenetic analyses? A case study on major arthropod relationships

(2009) Björn M von Reumont et al.   BMC EVOLUTIONARY BIOLOGY

An updated 18S rRNA phylogeny of tunicates based on mixture and secondary structure models

(2009) Georgia Tsagkogeorga et al.   BMC EVOLUTIONARY BIOLOGY

A Monte Carlo Approach Successfully Identifies Randomness in Multiple Sequence Alignments : A More Objective Means of Data Exclusion

(2009) Bernhard Misof et al.   SYSTEMATIC BIOLOGY

A phylogeny of anisopterous dragonflies (Insecta, Odonata) using mtRNA genes and mixed nucleotide/doublet models

(2008) G. Fleck et al.   JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH

Phylogeny and Evolution of Glass Sponges (Porifera, Hexactinellida)

(2008) Martin Dohrmann et al.   SYSTEMATIC BIOLOGY