Evolution of endogenous retroviruses in the Suidae: evidence for different viral subpopulations in African and Eurasian host species

Distinctive differences in long terminal repeat sequences between γ1 endogenous retroviruses of African and Eurasian suid species

(2011) Fabrícia Ferreira do Nascimento et al.   INFECTION GENETICS AND EVOLUTION

Analysis of complete mitochondrial genomes from extinct and extant rhinoceroses reveals lack of phylogenetic resolution

(2009) Eske Willerslev et al.   BMC EVOLUTIONARY BIOLOGY

Distribution of Endogenous Retroviruses in Crocodilians

(2009) W. Jaratlerdsiri et al.   JOURNAL OF VIROLOGY

Extensive HIV-1 Intra-Host Recombination Is Common in Tissues with Abnormal Histopathology

(2009) Susanna L. Lamers et al.   PLoS One

Gene tree discordance, phylogenetic inference and the multispecies coalescent

(2009) James H. Degnan et al.   TRENDS IN ECOLOGY & EVOLUTION

Effects of Retroviruses on Host Genome Function

(2008) Patric Jern et al.   Annual Review of Genetics

Phylogenetic Inference Using Whole Genomes

(2008) Bruce Rannala et al.   Annual Review of Genomics and Human Genetics

Relationships of Gag-pol Diversity between Ty3/Gypsy and Retroviridae LTR retroelements and the three kings hypothesis

(2008) Carlos Llorens et al.   BMC EVOLUTIONARY BIOLOGY

Cytochrome b sequence data suggest rapid speciation within the Paramecium aurelia species complex

(2008) Dana Barth et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

An exploratory algorithm to identify intra-host recombinant viral sequences

(2008) Marco Salemi et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION