Modeling the within-host dynamics of HIV infection

Contribution of Follicular Dendritic Cells to Persistent HIV Viremia

(2013) J. Zhang et al.   JOURNAL OF VIROLOGY

Barriers to a cure for HIV: new ways to target and eradicate HIV-1 reservoirs

(2013) Christine Katlama et al.   LANCET

Redefining the Viral Reservoirs that Prevent HIV-1 Eradication

(2012) Evelyn Eisele et al.   IMMUNITY

Mechanisms of enhanced HIV spread through T-cell virological synapses

(2012) Benjamin M. Dale et al.   IMMUNOLOGICAL REVIEWS

Administration of vorinostat disrupts HIV-1 latency in patients on antiretroviral therapy

(2012) N. M. Archin et al.   NATURE

Antiretroviral dynamics determines HIV evolution and predicts therapy outcome

(2012) Daniel I S Rosenbloom et al.   NATURE MEDICINE

A quantitative basis for antiretroviral therapy for HIV-1 infection

(2012) Benjamin L Jilek et al.   NATURE MEDICINE

Immediate antiviral therapy appears to restrict resting CD4+ cell HIV-1 infection without accelerating the decay of latent infection

(2012) N. M. Archin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Pre-existence and emergence of drug resistance in a generalized model of intra-host viral dynamics

(2012) Helen K. Alexander et al.   Epidemics

An “Escape Clock” for Estimating the Turnover of SIV DNA in Resting CD4+ T Cells

(2012) Jeanette Reece et al.   PLoS Pathogens

Early Low-Titer Neutralizing Antibodies Impede HIV-1 Replication and Select for Virus Escape

(2012) Katharine J. Bar et al.   PLoS Pathogens

HIV cure and eradication: how will we get from the laboratory to effective clinical trials?

(2011) Sharon R Lewin et al.   AIDS

HDAC inhibitors in HIV

(2011) Fiona Wightman et al.   IMMUNOLOGY AND CELL BIOLOGY

Fitness Costs and Diversity of the Cytotoxic T Lymphocyte (CTL) Response Determine the Rate of CTL Escape during Acute and Chronic Phases of HIV Infection

(2011) V. V. Ganusov et al.   JOURNAL OF VIROLOGY

Cell-to-cell spread of HIV permits ongoing replication despite antiretroviral therapy

(2011) Alex Sigal et al.   NATURE

Implications of CTL-Mediated Killing of HIV-Infected Cells during the Non-Productive Stage of Infection

(2011) Christian L. Althaus et al.   PLoS One

Stochastic Theory of Early Viral Infection: Continuous versus Burst Production of Virions

(2011) John E. Pearson et al.   PLoS Computational Biology

A Stochastic Model of Latently Infected Cell Reactivation and Viral Blip Generation in Treated HIV Patients

(2011) Jessica M. Conway et al.   PLoS Computational Biology

Why Don't CD8+ T Cells Reduce the Lifespan of SIV-Infected Cells In Vivo?

(2011) Marjet Elemans et al.   PLoS Computational Biology

Estimating time since infection in early homogeneous HIV-1 samples using a poisson model

(2010) Elena E Giorgi et al.   BMC BIOINFORMATICS

Does Cytolysis by CD8+ T Cells Drive Immune Escape in HIV Infection?

(2010) M. Balamurali et al.   JOURNAL OF IMMUNOLOGY

Viral Dynamics during Primary Simian Immunodeficiency Virus Infection: Effect of Time-Dependent Virus Infectivity

(2010) N. K. Vaidya et al.   JOURNAL OF VIROLOGY

Estimation of the Initial Viral Growth Rate and Basic Reproductive Number during Acute HIV-1 Infection

(2010) R. M. Ribeiro et al.   JOURNAL OF VIROLOGY

Transmission of Single HIV-1 Genomes and Dynamics of Early Immune Escape Revealed by Ultra-Deep Sequencing

(2010) Will Fischer et al.   PLoS One

HIV-1 Virological Synapse: Live Imaging of Transmission

(2010) Jerome Feldmann et al.   Viruses-Basel

Cell-to-Cell Spread of Retroviruses

(2010) Quentin J. Sattentau   Viruses-Basel

Treatment-Mediated Alterations in HIV Fitness Preserve CD4+ T Cell Counts but Have Minimal Effects on Viral Load

(2010) Naveen K. Vaidya et al.   PLoS Computational Biology

CD8+ Lymphocytes Control Viral Replication in SIVmac239-Infected Rhesus Macaques without Decreasing the Lifespan of Productively Infected Cells

(2010) Nichole R. Klatt et al.   PLoS Pathogens

In Vivo CD8+ T-Cell Suppression of SIV Viremia Is Not Mediated by CTL Clearance of Productively Infected Cells

(2010) Joseph K. Wong et al.   PLoS Pathogens

CD8+ T Cell Control of HIV—A Known Unknown

(2010) Miles P. Davenport et al.   PLoS Pathogens

The first T cell response to transmitted/founder virus contributes to the control of acute viremia in HIV-1 infection

(2009) Nilu Goonetilleke et al.   JOURNAL OF EXPERIMENTAL MEDICINE

Modeling HIV persistence, the latent reservoir, and viral blips

(2009) Libin Rong et al.   JOURNAL OF THEORETICAL BIOLOGY

Modeling sequence evolution in acute HIV-1 infection

(2009) Ha Youn Lee et al.   JOURNAL OF THEORETICAL BIOLOGY

High Specific Infectivity of Plasma Virus from the Pre-Ramp-Up and Ramp-Up Stages of Acute Simian Immunodeficiency Virus Infection

(2009) Z.-M. Ma et al.   JOURNAL OF VIROLOGY

HIV reservoir size and persistence are driven by T cell survival and homeostatic proliferation

(2009) Nicolas Chomont et al.   NATURE MEDICINE

Modeling Latently Infected Cell Activation: Viral and Latent Reservoir Persistence, and Viral Blips in HIV-infected Patients on Potent Therapy

(2009) Libin Rong et al.   PLoS Computational Biology

Initial B-Cell Responses to Transmitted Human Immunodeficiency Virus Type 1: Virion-Binding Immunoglobulin M (IgM) and IgG Antibodies Followed by Plasma Anti-gp41 Antibodies with Ineffective Control of Initial Viremia

(2008) G. D. Tomaras et al.   JOURNAL OF VIROLOGY

Rethinking the heterosexual infectivity of HIV-1: a systematic review and meta-analysis

(2008) Kimberly A Powers et al.   LANCET INFECTIOUS DISEASES

Dose-response curve slope sets class-specific limits on inhibitory potential of anti-HIV drugs

(2008) Lin Shen et al.   NATURE MEDICINE

Low-level viremia persists for at least 7 years in patients on suppressive antiretroviral therapy

(2008) S. Palmer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identification and characterization of transmitted and early founder virus envelopes in primary HIV-1 infection

(2008) B. F. Keele et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rates of HIV immune escape and reversion: implications for vaccination

(2008) Miles P. Davenport et al.   TRENDS IN MICROBIOLOGY

Dynamics of Immune Escape during HIV/SIV Infection

(2008) Christian L. Althaus et al.   PLoS Computational Biology