phylotree.js - a JavaScript library for application development and interactive data visualization in phylogenetics

Datamonkey 2.0: A Modern Web Application for Characterizing Selective and Other Evolutionary Processes

(2018) Steven Weaver et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylo.io: Interactive Viewing and Comparison of Large Phylogenetic Trees on the Web

(2016) Oscar Robinson et al.   MOLECULAR BIOLOGY AND EVOLUTION

Geometric Constraints Dominate the Antigenic Evolution of Influenza H3N2 Hemagglutinin

(2015) Austin G. Meyer et al.   PLoS Pathogens

RELAX: Detecting Relaxed Selection in a Phylogenetic Framework

(2014) Joel O. Wertheim et al.   MOLECULAR BIOLOGY AND EVOLUTION

NeXML: Rich, Extensible, and Verifiable Representation of Comparative Data and Metadata

(2012) Rutger A. Vos et al.   SYSTEMATIC BIOLOGY

D³ Data-Driven Documents

(2011) M. Bostock et al.   IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS

Untangling Tanglegrams: Comparing Trees by Their Drawings

(2010) Balaji Venkatachalam et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

jsPhyloSVG: A Javascript Library for Visualizing Interactive and Vector-Based Phylogenetic Trees on the Web

(2010) Samuel A. Smits et al.   PLoS One

phyloXML: XML for evolutionary biology and comparative genomics

(2009) Mira V Han et al.   BMC BIOINFORMATICS