Phylotastic! Making tree-of-life knowledge accessible, reusable and convenient

The taxonomic name resolution service: an online tool for automated standardization of plant names

(2013) Brad Boyle et al.   BMC BIOINFORMATICS

Ten Simple Rules for the Open Development of Scientific Software

(2012) Andreas Prlić et al.   PLoS Computational Biology

Understanding angiosperm diversification using small and large phylogenetic trees

(2011) S. A. Smith et al.   AMERICAN JOURNAL OF BOTANY

BIO::Phylo-phyloinformatic analysis using perl

(2011) Rutger A Vos et al.   BMC BIOINFORMATICS

Models, algorithms and programs for phylogeny reconciliation

(2011) J.-P. Doyon et al.   BRIEFINGS IN BIOINFORMATICS

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Evolutionary informatics: unifying knowledge about the diversity of life

(2011) Cynthia S. Parr et al.   TRENDS IN ECOLOGY & EVOLUTION

pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree

(2010) Frederick A Matsen et al.   BMC BIOINFORMATICS

The rate of growth in scientific publication and the decline in coverage provided by Science Citation Index

(2010) Peder Olesen Larsen et al.   SCIENTOMETRICS

Did Genetic Drift Drive Increases in Genome Complexity?

(2010) Kenneth D. Whitney et al.   PLoS Genetics

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

(2010) Jeremy Goecks et al.   GENOME BIOLOGY

phyloXML: XML for evolutionary biology and comparative genomics

(2009) Mira V Han et al.   BMC BIOINFORMATICS

Moby and Moby 2: Creatures of the Deep (Web)

(2009) B. P. Vandervalk et al.   BRIEFINGS IN BIOINFORMATICS

Biodiversity informatics: the challenge of linking data and the role of shared identifiers

(2008) R. D. M. Page   BRIEFINGS IN BIOINFORMATICS

GENETIC DISTANCE BETWEEN SPECIES PREDICTS NOVEL TRAIT EXPRESSION IN THEIR HYBRIDS

(2008) Rike Stelkens et al.   EVOLUTION

The PhyLoTA Browser: Processing GenBank for Molecular Phylogenetics Research

(2008) Michael J. Sanderson et al.   SYSTEMATIC BIOLOGY