Quartet decomposition server: a platform for analyzing phylogenetic trees

A Rooted Net of Life

(2011) David Williams et al.   Biology Direct

Biased gene transfer in microbial evolution

(2011) Cheryl P. Andam et al.   NATURE REVIEWS MICROBIOLOGY

Complex Evolutionary History of the Aeromonas veronii Group Revealed by Host Interaction and DNA Sequence Data

(2011) Adam C. Silver et al.   PLoS One

Genome sequencing of environmental Escherichia coli expands understanding of the ecology and speciation of the model bacterial species

(2011) C. Luo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Tree and Net Components of Prokaryote Evolution

(2010) Pere Puigbò et al.   Genome Biology and Evolution

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

High Frequency of Horizontal Gene Transfer in the Oceans

(2010) L. D. McDaniel et al.   SCIENCE

Inferring and Validating Horizontal Gene Transfer Events Using Bipartition Dissimilarity

(2010) Alix Boc et al.   SYSTEMATIC BIOLOGY

On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales

(2009) O. Zhaxybayeva et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA