Binding Site Prediction for Protein-Protein Interactions and Novel Motif Discovery using Re-occurring Polypeptide Sequences

Yeast protein–protein interaction binding sites: prediction from the motif–motif, motif–domain and domain–domain levels

(2010) Erli Pang et al.   Molecular BioSystems

Critical assessment of sequence-based protein-protein interaction prediction methods that do not require homologous protein sequences

(2009) Yungki Park   BMC BIOINFORMATICS

The Pfam protein families database

(2009) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Recent Progress and Future Directions in Protein-Protein Docking

(2008) David Ritchie   CURRENT PROTEIN & PEPTIDE SCIENCE

Genome-wide inference of protein interaction sites: lessons from the yeast high-quality negative protein–protein interaction dataset

(2008) Jie Guo et al.   NUCLEIC ACIDS RESEARCH

Global investigation of protein–protein interactions in yeast Saccharomyces cerevisiae using re-occurring short polypeptide sequences

(2008) S. Pitre et al.   NUCLEIC ACIDS RESEARCH

Using support vector machine combined with auto covariance to predict protein–protein interactions from protein sequences

(2008) Yanzhi Guo et al.   NUCLEIC ACIDS RESEARCH

SMART 6: recent updates and new developments

(2008) I. Letunic et al.   NUCLEIC ACIDS RESEARCH

InterPro: the integrative protein signature database

(2008) S. Hunter et al.   NUCLEIC ACIDS RESEARCH