Improving pan-genome annotation using whole genome multiple alignment
Published 2011 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Improving pan-genome annotation using whole genome multiple alignment
Authors
Keywords
-
Journal
BMC BIOINFORMATICS
Volume 12, Issue 1, Pages 272
Publisher
Springer Nature
Online
2011-07-02
DOI
10.1186/1471-2105-12-272
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Mugsy: fast multiple alignment of closely related whole genomes
- (2010) Samuel V. Angiuoli et al. BIOINFORMATICS
- Missing genes in the annotation of prokaryotic genomes
- (2010) Andrew S Warren et al. BMC BIOINFORMATICS
- Prodigal: prokaryotic gene recognition and translation initiation site identification
- (2010) Doug Hyatt et al. BMC BIOINFORMATICS
- Using comparative genome analysis to identify problems in annotated microbial genomes
- (2010) M. S. Poptsova et al. MICROBIOLOGY-SGM
- GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes
- (2010) Amrita Pati et al. NATURE METHODS
- Genome annotation: man versus machine
- (2010) Nicola K. Petty NATURE REVIEWS MICROBIOLOGY
- GenBank
- (2010) D. A. Benson et al. NUCLEIC ACIDS RESEARCH
- Re-Annotation Is an Essential Step in Systems Biology Modeling of Functional Genomics Data
- (2010) Bart H. J. van den Berg et al. PLoS One
- progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement
- (2010) Aaron E. Darling et al. PLoS One
- Genome (re-)annotation and open-source annotation pipelines
- (2010) Roland J. Siezen et al. Microbial Biotechnology
- Multiple whole-genome alignments without a reference organism
- (2009) I. Dubchak et al. GENOME RESEARCH
- Evaluation of Three Automated Genome Annotations for Halorhabdus utahensis
- (2009) Peter Bakke et al. PLoS One
- Organised Genome Dynamics in the Escherichia coli Species Results in Highly Diverse Adaptive Paths
- (2009) Marie Touchon et al. PLoS Genetics
- NeMeSys: a biological resource for narrowing the gap between sequence and function in the human pathogen Neisseria meningitidis
- (2009) Christophe Rusniok et al. GENOME BIOLOGY
- Prediction of translation initiation site for microbial genomes with TriTISA
- (2008) Gang-Qing Hu et al. BIOINFORMATICS
- Large gene overlaps in prokaryotic genomes: result of functional constraints or mispredictions?
- (2008) Albert Pallejà et al. BMC GENOMICS
- A Genomic Distance Based on MUM Indicates Discontinuity between Most Bacterial Species and Genera
- (2008) M. Deloger et al. JOURNAL OF BACTERIOLOGY
- Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic Annotation
- (2008) Samuel V. Angiuoli et al. OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExplorePublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More