A Simple Approach to Ranking Differentially Expressed Gene Expression Time Courses through Gaussian Process Regression

A Robust Bayesian Two-Sample Test for Detecting Intervals of Differential Gene Expression in Microarray Time Series

(2010) Oliver Stegle et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Gaussian process regression bootstrapping: exploring the effects of uncertainty in time course data

(2009) Paul D. W. Kirk et al.   BIOINFORMATICS

Reconstruction of transcriptional dynamics from gene reporter data using differential equations

(2008) Bärbel Finkenstädt et al.   BIOINFORMATICS

Gaussian process modelling of latent chemical species: applications to inferring transcription factor activities

(2008) P. Gao et al.   BIOINFORMATICS

BATS: a Bayesian user-friendly software for Analyzing Time Series microarray experiments

(2008) Claudia Angelini et al.   BMC BIOINFORMATICS

Direct targets of the TRP63 transcription factor revealed by a combination of gene expression profiling and reverse engineering

(2008) G. Della Gatta et al.   GENOME RESEARCH