RAG: An update to the RNA-As-Graphs resource

A predictive model for secondary RNA structure using graph theory and a neural network

(2010) Denise R Koessler et al.   BMC BIOINFORMATICS

Computational approaches to 3D modeling of RNA

(2010) Christian Laing et al.   JOURNAL OF PHYSICS-CONDENSED MATTER

Computational generation and screening of RNA motifs in large nucleotide sequence pools

(2010) Namhee Kim et al.   NUCLEIC ACIDS RESEARCH

RNA STRAND: The RNA Secondary Structure and Statistical Analysis Database

(2008) Mirela Andronescu et al.   BMC BIOINFORMATICS

A novel representation of RNA secondary structure based on element-contact graphs

(2008) Wenjie Shu et al.   BMC BIOINFORMATICS

Large Deviations for Random Trees and the Branching of RNA Secondary Structures

(2008) Yuri Bakhtin et al.   BULLETIN OF MATHEMATICAL BIOLOGY

Topological Classification of RNA Structures

(2008) Michael Bon et al.   JOURNAL OF MOLECULAR BIOLOGY

PseudoBase++: an extension of PseudoBase for easy searching, formatting and visualization of pseudoknots

(2008) M. Taufer et al.   NUCLEIC ACIDS RESEARCH

Rfam: updates to the RNA families database

(2008) P. P. Gardner et al.   NUCLEIC ACIDS RESEARCH

The stimulatory RNA of the Visna-Maedi retrovirus ribosomal frameshifting signal is an unusual pseudoknot with an interstem element

(2008) S. Pennell et al.   RNA