Factors that drive the increasing use of FFPE tissue in basic and translational cancer research
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Factors that drive the increasing use of FFPE tissue in basic and translational cancer research
Authors
Keywords
-
Journal
BIOTECHNIC & HISTOCHEMISTRY
Volume -, Issue -, Pages 1-14
Publisher
Informa UK Limited
Online
2018-08-16
DOI
10.1080/10520295.2018.1446101
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Visualization of tumor heterogeneity by in situ padlock probe technology in colorectal cancer
- (2017) Amin El-Heliebi et al. HISTOCHEMISTRY AND CELL BIOLOGY
- Unknown
- (2017) Oncotarget
- Issues in collecting, processing and storing human tissues and associated information to support biomedical research
- (2017) William E. Grizzle et al. Cancer Biomarkers
- Effects of Cold Ischemia on Gene Expression: A Review and Commentary
- (2016) William E. Grizzle et al. BIOPRESERVATION AND BIOBANKING
- Consent for Biobanking: The Legal Frameworks of Countries in the BioSHaRE-EU Project
- (2016) Jane Kaye et al. BIOPRESERVATION AND BIOBANKING
- Assays for Qualification and Quality Stratification of Clinical Biospecimens Used in Research: A Technical Report from the ISBER Biospecimen Science Working Group
- (2016) Fay Betsou et al. BIOPRESERVATION AND BIOBANKING
- Performance comparison of two commercial human whole-exome capture systems on formalin-fixed paraffin-embedded lung adenocarcinoma samples
- (2016) Silvia Bonfiglio et al. BMC CANCER
- Discordance between original and central laboratories in ER and HER2 results in a diverse, population-based sample
- (2016) Jennifer J. Griggs et al. BREAST CANCER RESEARCH AND TREATMENT
- Effective quality management practices in routine clinical next-generation sequencing
- (2016) Francine B. de Abreu et al. CLINICAL CHEMISTRY AND LABORATORY MEDICINE
- Investigating intra-tumor heterogeneity and expression gradients of miR-21, miR-92a and miR-200c and their potential of predicting lymph node metastases in early colorectal cancer
- (2016) Rikke Karlin Jepsen et al. EXPERIMENTAL AND MOLECULAR PATHOLOGY
- A sensitive and high throughput TaqMan-based reverse transcription quantitative polymerase chain reaction assay efficiently discriminates ALK rearrangement from overexpression for lung cancer FFPE specimens
- (2016) Jrhau Lung et al. LUNG CANCER
- Determining HER2 (ERBB2) amplification status in women with breast cancer: final results from the Australian in situ hybridisation program
- (2016) Adrienne L. Morey et al. PATHOLOGY
- Comparison of whole-exome sequencing of matched fresh and formalin fixed paraffin embedded melanoma tumours: implications for clinical decision making
- (2016) Ricardo De Paoli-Iseppi et al. PATHOLOGY
- Segmental Chromosomal Aberrations in Localized Neuroblastoma Can be Detected in Formalin-Fixed Paraffin-Embedded Tissue Samples and Are Associated With Recurrence
- (2016) Navin Pinto et al. PEDIATRIC BLOOD & CANCER
- Comparison of the QuantiGene 2.0 Assay and Real-Time RT-PCR in the Detection of p53 Isoform mRNA Expression in Formalin-Fixed Paraffin-Embedded Tissues- A Preliminary Study
- (2016) Brianna C. Morten et al. PLoS One
- MicroRNA Stability in FFPE Tissue Samples: Dependence on GC Content
- (2016) Yu Kakimoto et al. PLoS One
- Using reverse-phase protein arrays as pharmacodynamic assays for functional proteomics, biomarker discovery, and drug development in cancer
- (2016) Yiling Lu et al. SEMINARS IN ONCOLOGY
- Effects of Cold Ischemia on Gene Expression: A Review and Commentary
- (2016) William E. Grizzle et al. Biopreservation and Biobanking
- Consent for Biobanking: The Legal Frameworks of Countries in the BioSHaRE-EU Project
- (2016) Jane Kaye et al. Biopreservation and Biobanking
- Assays for Qualification and Quality Stratification of Clinical Biospecimens Used in Research: A Technical Report from the ISBER Biospecimen Science Working Group
- (2016) Fay Betsou et al. Biopreservation and Biobanking
- Prospective validation of microRNA signatures for detecting pancreatic malignant transformation in endoscopic-ultrasound guided fine-needle aspiration biopsies
- (2016) Adam E. Frampton et al. Oncotarget
- Sensitive and affordable diagnostic assay for the quantitative detection of anaplastic lymphoma kinase (ALK) alterations in patients with non-small cell lung cancer
- (2016) Elisa Dama et al. Oncotarget
- Digital Sorting of Pure Cell Populations Enables Unambiguous Genetic Analysis of Heterogeneous Formalin-Fixed Paraffin-Embedded Tumors by Next Generation Sequencing
- (2016) Chiara Bolognesi et al. Scientific Reports
- Unknown
- (2016) Cancer Medicine
- Molecular Pathology: A Requirement for Precision Medicine in Cancer
- (2016) Manfred Dietel Oncology Research and Treatment
- Unknown
- (2016) PROTEOMICS
- A targeted next-generation sequencing method for identifying clinically relevant mutation profiles in lung adenocarcinoma
- (2016) Di Shao et al. Scientific Reports
- Quantitative Profiling of Single Formalin Fixed Tumour Sections: proteomics for translational research
- (2016) Christopher S. Hughes et al. Scientific Reports
- Genomic DNA extraction methods using formalin-fixed paraffin-embedded tissue
- (2015) Keerti Potluri et al. ANALYTICAL BIOCHEMISTRY
- Effect of Duration of Ex Vivo Ischemia Time and Storage Period on RNA Quality in Biobanked Human Renal Cell Carcinoma Tissue
- (2015) Hongyan Sun et al. ANNALS OF SURGICAL ONCOLOGY
- Biobanking in Genomic Medicine
- (2015) Jane H. Zhou et al. ARCHIVES OF PATHOLOGY & LABORATORY MEDICINE
- A Model to Estimate Frozen Tissue Collection Targets in Biobanks to Support Cancer Research
- (2015) Anna J. Meredith et al. BIOPRESERVATION AND BIOBANKING
- Quality Management of Biorepositories
- (2015) William E. Grizzle et al. BIOPRESERVATION AND BIOBANKING
- What Are Some of the ELSI Challenges of International Collaborations Involving Biobanks, Global Sample Collection, and Genomic Data Sharing and How Should They Be Addressed?
- (2015) Roger Bjugn et al. BIOPRESERVATION AND BIOBANKING
- MicroRNA Expression in Formalin-fixed Paraffin-embedded Cancer Tissue: Identifying Reference MicroRNAs and Variability
- (2015) Mogens Karsbøl Boisen et al. BMC CANCER
- Whole exome sequencing (WES) on formalin-fixed, paraffin-embedded (FFPE) tumor tissue in gastrointestinal stromal tumors (GIST)
- (2015) Annalisa Astolfi et al. BMC GENOMICS
- Delivering a research-enabled multistakeholder partnership for enhanced patient care at a population level: The Northern Ireland Comprehensive Cancer Program
- (2015) Mark Lawler et al. CANCER
- Accuracy of Molecular Data Generated with FFPE Biospecimens: Lessons from the Literature
- (2015) S. R. Greytak et al. CANCER RESEARCH
- The use of exome capture RNA-seq for highly degraded RNA with application to clinical cancer sequencing
- (2015) Marcin Cieslik et al. GENOME RESEARCH
- Factors affecting immunoreactivity in long-term storage of formalin-fixed paraffin-embedded tissue sections
- (2015) Federica Grillo et al. HISTOCHEMISTRY AND CELL BIOLOGY
- Loss of antigenicity with tissue age in breast cancer
- (2015) Susan E Combs et al. LABORATORY INVESTIGATION
- Prospective Validation of a 21-Gene Expression Assay in Breast Cancer
- (2015) Joseph A. Sparano et al. NEW ENGLAND JOURNAL OF MEDICINE
- Impact of upfront cellular enrichment by laser capture microdissection on protein and phosphoprotein drug target signaling activation measurements in human lung cancer: Implications for personalized medicine
- (2015) Elisa Baldelli et al. Proteomics Clinical Applications
- A Model to Estimate Frozen Tissue Collection Targets in Biobanks to Support Cancer Research
- (2015) Anna J. Meredith et al. Biopreservation and Biobanking
- Quality Management of Biorepositories
- (2015) William E. Grizzle et al. Biopreservation and Biobanking
- What Are Some of the ELSI Challenges of International Collaborations Involving Biobanks, Global Sample Collection, and Genomic Data Sharing and How Should They Be Addressed?
- (2015) Roger Bjugn et al. Biopreservation and Biobanking
- Targeted or whole genome sequencing of formalin fixed tissue samples: potential applications in cancer genomics
- (2015) Sarah Munchel et al. Oncotarget
- Biobanks in the era of personalized medicine: objectives, challenges, and innovation
- (2015) Judita Kinkorová EPMA Journal
- Developing a Prognostic Micro-RNA Signature for Human Cervical Carcinoma
- (2015) Christine How et al. PLoS One
- A Review of Preanalytical Factors Affecting Molecular, Protein, and Morphological Analysis of Formalin-Fixed, Paraffin-Embedded (FFPE) Tissue: How Well Do You Know Your FFPE Specimen?
- (2014) B. Paige Bass et al. ARCHIVES OF PATHOLOGY & LABORATORY MEDICINE
- Assessing the Financial, Operational, and Social Sustainability of a Biobank: The Wales Cancer Bank Case Study
- (2014) Alison Parry-Jones BIOPRESERVATION AND BIOBANKING
- Funding Sources for Canadian Biorepositories: The Role of User Fees and Strategies to Help Fill the Gap
- (2014) Rebecca O. Barnes et al. BIOPRESERVATION AND BIOBANKING
- Biobank Bootstrapping: Is Biobank Sustainability Possible Through Cost Recovery?
- (2014) Monique Albert et al. BIOPRESERVATION AND BIOBANKING
- National Cancer Institute Biospecimen Evidence-Based Practices: A Novel Approach to Pre-analytical Standardization
- (2014) Kelly B. Engel et al. BIOPRESERVATION AND BIOBANKING
- Recurrent read-through fusion transcripts in breast cancer
- (2014) Katherine E. Varley et al. BREAST CANCER RESEARCH AND TREATMENT
- High-Throughput Detection of Clinically Relevant Mutations in Archived Tumor Samples by Multiplexed PCR and Next-Generation Sequencing
- (2014) R. Bourgon et al. CLINICAL CANCER RESEARCH
- Sequence Artifacts in DNA from Formalin-Fixed Tissues: Causes and Strategies for Minimization
- (2014) H. Do et al. CLINICAL CHEMISTRY
- A tissue quality index: an intrinsic control for measurement of effects of preanalytical variables on FFPE tissue
- (2014) Veronique M Neumeister et al. LABORATORY INVESTIGATION
- Preanalytical variables and phosphoepitope expression in FFPE tissue: quantitative epitope assessment after variable cold ischemic time
- (2014) Maria Vassilakopoulou et al. LABORATORY INVESTIGATION
- Fluorescence in situ analysis of soft tissue tumor associated genetic alterations in formalin-fixed paraffin-embedded tissue
- (2014) Heike Horn et al. PATHOLOGY RESEARCH AND PRACTICE
- A Multiplex Two-Color Real-Time PCR Method for Quality-Controlled Molecular Diagnostic Testing of FFPE Samples
- (2014) Jiyoun Yeo et al. PLoS One
- Development and Progress of Ireland's Biobank Network: Ethical, Legal, and Social Implications (ELSI), Standardized Documentation, Sample and Data Release, and International Perspective
- (2013) Blanaid Mee et al. BIOPRESERVATION AND BIOBANKING
- Defining Biobank
- (2013) Robert Hewitt et al. BIOPRESERVATION AND BIOBANKING
- The Cancer Genome Atlas Pan-Cancer analysis project
- (2013) John N Weinstein et al. NATURE GENETICS
- Quality Control of RNA Preservation and Extraction from Paraffin-Embedded Tissue: Implications for RT-PCR and Microarray Analysis
- (2013) Karl Kashofer et al. PLoS One
- Applications of mass spectrometry for quantitative protein analysis in formalin-fixed paraffin-embedded tissues
- (2013) Carine Steiner et al. PROTEOMICS
- Complete solubilization of formalin-fixed, paraffin-embedded tissue may improve proteomic studies
- (2013) Shan-Rong Shi et al. Proteomics Clinical Applications
- Characterizing biobank organizations in the U.S.: results from a national survey
- (2013) Gail E Henderson et al. Genome Medicine
- Defining diagnostic tissue in the era of personalized medicine
- (2012) C. C. Cheung et al. CANADIAN MEDICAL ASSOCIATION JOURNAL
- Biospecimen reporting for improved study quality (BRISQ)
- (2012) Helen M. Moore et al. CLINICA CHIMICA ACTA
- Impact of pre-analytical factors on the proteomic analysis of formalin-fixed paraffin-embedded tissue
- (2012) Seonaid M. Thompson et al. Proteomics Clinical Applications
- Maintaining Breast Cancer Specimen Integrity and Individual or Simultaneous Extraction of Quality DNA, RNA, and Proteins from Allprotect-Stabilized and Nonstabilized Tissue Samples
- (2011) Blanaid C. Mee et al. BIOPRESERVATION AND BIOBANKING
- Biobanking residual tissues
- (2011) Peter H. J. Riegman et al. HUMAN GENETICS
- Antigen Retrieval Immunohistochemistry
- (2011) Shan-Rong Shi et al. JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY
- Biobanks need publicity
- (2011) George Gaskell et al. NATURE
- One-Step Preservation of Phosphoproteins and Tissue Morphology at Room Temperature for Diagnostic and Research Specimens
- (2011) Claudius Mueller et al. PLoS One
- Histological Assessment of PAXgene Tissue Fixation and Stabilization Reagents
- (2011) Marcel Kap et al. PLoS One
- Biospecimen Use in Cancer Research Over Two Decades
- (2010) Shevaun E. Hughes et al. BIOPRESERVATION AND BIOBANKING
- Combined effects of formalin fixation and tissue processing on immunorecognition
- (2009) D Otali et al. BIOTECHNIC & HISTOCHEMISTRY
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started